| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3019 |
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| Symbol | |
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| ID | 3725726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3531937 |
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| End bp | 3533220 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637752630 |
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| Product | C4-dicarboxylate transport system, large permease subunit |
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| Protein accession | YP_358424 |
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| Protein GI | 77920609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0108982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAC AAGTTTTTAT TATCCTGGCA TTGCTGCTGG GCTGTCTCGC CACCACCGTT
CCCGTCTTCA TCTCGCTGTT TTTCGCAGGC CTGGTCGGCT TGATGGTAGC CGGCATCGAT
GCGCAGATCG TTGTCGAGGT GCTGTATCGC AGCATGGACA AATTCGCCTT GATCGTGGTG
CTGTTTTTTG TACTGTGCGG CAACATCATG ACCAGCGGCA GCATTGTGCA GAAGCTCATC
AAAACCGCCG ATGCGCTGGT CGGGTTTCTG CCCGGCGGCC TGGCCATGGC CGGGATACTG
GCGTGCGGGT TTTTCGGCGC CATCTCCGGA TCGACGGTAG CGACGGTAGT GGCCATCGGC
GGCTTCATGA TTCCGGCGCT GATCAAGCAT GGCTACGATC CCGCGTTCAG TGTCGGCCTG
ATGACCACCG CACCGGTCTT GGGAGTGGTG ATCCCGCCCT CCATTTCCAT GATCCTTTAT
GCGATGATCT CCAACGATTC GCTGGAGGCG CTGTTCCTTA CCGGGTTTGT GCCGGGCCTG
ATGATTATCG TGGCCATGTC CGTTTATGCC GGGCTGTTCT GCCGGCAGCG CGGCCAACAG
ACCCGCCGCC GCCCGTCCAT GAAAGAACTG CTGGCGGTGC TGCGTGAAAG CATCTGGGCG
CTGCTGTTGC CGGTATTGAT CTTCGGCGGC ATCTATTCAG GCATTTTCAC CGCCAACGAA
GCGGCCGTGG TCGCCTGTTT TTATGCGTTT GTGGTGGAAA TTTTCATTCA TAAGGACCTG
CGCCTGCGGG ACGTGAAAAA GGTGGTGGTG TCCTCGGCGA TCACCTCCGC AACCTTGTTG
GTAATCGTTT CCGGCGCCTC GGTCTTCGGC GAATATCTGA CCTTTGAACA GATCCCGGAG
CATATCGCCC AAGCGGTAGT CGGCAGCGTG CAAAGTCCCT GGGTTTTTCT GATGGCCGTC
AACCTGCTGC TGCTGGTGGT GGGAATGTTC ATGGACATCA TATCCGCCAC CCTGATCCTG
ACGCCGATCT TCTTGCCTCT GCTGAGCCGC TTCGGCATCG ACAGCCTGCA TTTCGGCCTG
CTCATGACCC TCAATCTCGG CATCGGGTAT TGTACCCCGC CGCTGGGCGT GTCGCTGTAT
ATTTCCGGCG CCGTGGCCGA CCGCAATTTG CTCTATGTAT CCCGCGCGGT ACTGCCGTTC
CTGCTCATCC AGATCACTTT GTTGCTGCTT TTGACCTACA TACCCGAACT GGTGCTGTGG
TTGCCGCGCC TGGTGTACGG ATAA
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| Protein sequence | MDSQVFIILA LLLGCLATTV PVFISLFFAG LVGLMVAGID AQIVVEVLYR SMDKFALIVV
LFFVLCGNIM TSGSIVQKLI KTADALVGFL PGGLAMAGIL ACGFFGAISG STVATVVAIG
GFMIPALIKH GYDPAFSVGL MTTAPVLGVV IPPSISMILY AMISNDSLEA LFLTGFVPGL
MIIVAMSVYA GLFCRQRGQQ TRRRPSMKEL LAVLRESIWA LLLPVLIFGG IYSGIFTANE
AAVVACFYAF VVEIFIHKDL RLRDVKKVVV SSAITSATLL VIVSGASVFG EYLTFEQIPE
HIAQAVVGSV QSPWVFLMAV NLLLLVVGMF MDIISATLIL TPIFLPLLSR FGIDSLHFGL
LMTLNLGIGY CTPPLGVSLY ISGAVADRNL LYVSRAVLPF LLIQITLLLL LTYIPELVLW
LPRLVYG
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