Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2975 |
Symbol | tolB |
ID | 3725682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3485148 |
End bp | 3486479 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637752586 |
Product | TolB protein |
Protein accession | YP_358380 |
Protein GI | 77920565 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.508751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCTT CAACCTCAAA GACCTTATGG ATTAAAACTA TGCGCCGTTT CGTGACCCTG CTTATCGCCC TGCTCTGCCT GTCGGCGACT GCCGTCCAGG CCCAGGTTGA AATTCGCGCT CCTGGCCAAC AGACCATTGC CGTGGCCAAC ACCCAACTTG TCCCCCTGTC CGGAACGCCG CTACCCGCCA TAGCCGCGGA GTTGCACGAT GTCATGGCTG CCGACCTGGA GCTGTCCGGC CTGTTTCGCC AGCTCGACCC GGCGGCGTTT CTGGATGATG CGCGGCGTCC CGGTCTGACC AGTTCTCGGG TCGATTTCAA TCAGTGGGCC CTTCTGGGTG CCGAAATTCT TATCAAGGGC GGTTACCAAC TGCAAGGGGA ACGGCTGCTG GTCGATTTTC GTCTGTACGA TGTCGTTCAC AGGCGGTTGT TGACCGGTCG CCGCTATGCG GGACTTCGAC GCGATGTGCG TACCATGGCG CATAAATTCG CTGATCAGGT GTTGAAGAGC GTCACCGGCC GGGAAGGTCC GTTCAGTTCC CGTATCGCTT ATATCGACAA CCGCACCGGG CACAAGGAGC TGTATCTGAT GGATACCGAC GGCGCCAATG CCCTGCGCCT TACCGATCAC CGCTCCATTG TTCTCAATCC CGATTTTTCG CCCAACGGAC GCGAGGTCAT TTACACCTCG TACCGGCGCG GCAATCCCGA TCTCTACCGG AAACAGTTGA GCACCGGGCA GGAAGCCCGC CTGGCTTTTA AAAAAGGCCT GAATATAGCA GCGCGCTTTC GGCCTGACGG TCGGGAAATT GCGCTCACCC AGTCGGCCAC CGGCAATCCC GAACTGATGC TGCTCGGCAC CGACGGCAGT CGCCGCCGCC GTCTTACCAG TCATTGGGGT ATCGATGTCG ATCCGAGCTG GAGCCCGGCC GGCGACCGGC TGGCTTTTGT CTCCGACCGG CAGGGCAATC CGCATATTTT CGTCATGGAC CTGCTCGGCG GCCAGACCGC GCGACTTACC GCTAACGGTA AATACAACGC CACTCCGGCC TGGAGTCCCG ACGGCAAGCG TATTGCCTTT ACCCGCCTGG AAAAGGGCGT GTTTGATATC TATACCGTTC GACCCGACGG TACGGACGAA CGCCGCCTGA CTTTCGGTCC CGGCAATAAA GAGCACCCCC GCTGGAGCCC GGACAGCCGC TTCCTGGTCT ATTCTTCCGA TCAGGACGGC CGTAAGGGCA TTTACATCAT GCGGGCCGAT GGCACCGGCA TACGCCGCAT CTCGGCCGGT GGCGGACAGT GCCAACACCC GGCATGGTCC GGTCAGCGGT GA
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Protein sequence | MSSSTSKTLW IKTMRRFVTL LIALLCLSAT AVQAQVEIRA PGQQTIAVAN TQLVPLSGTP LPAIAAELHD VMAADLELSG LFRQLDPAAF LDDARRPGLT SSRVDFNQWA LLGAEILIKG GYQLQGERLL VDFRLYDVVH RRLLTGRRYA GLRRDVRTMA HKFADQVLKS VTGREGPFSS RIAYIDNRTG HKELYLMDTD GANALRLTDH RSIVLNPDFS PNGREVIYTS YRRGNPDLYR KQLSTGQEAR LAFKKGLNIA ARFRPDGREI ALTQSATGNP ELMLLGTDGS RRRRLTSHWG IDVDPSWSPA GDRLAFVSDR QGNPHIFVMD LLGGQTARLT ANGKYNATPA WSPDGKRIAF TRLEKGVFDI YTVRPDGTDE RRLTFGPGNK EHPRWSPDSR FLVYSSDQDG RKGIYIMRAD GTGIRRISAG GGQCQHPAWS GQR
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