Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2866 |
Symbol | nrfA |
ID | 3725572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3351991 |
End bp | 3353427 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637752476 |
Product | cytochrome c nitrite reductase |
Protein accession | YP_358271 |
Protein GI | 77920456 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCAC AGAAAGACAA GACAAAATTT CAGATCGTGG TTATCAGTGT CGCTGTCATA GCGGCAGTGG CCGCCGTTCT GATTGCCGGC TTGCTCATGA ATATTTTCGA GCGCAAAGCC GAGGCGCTGA AACCGTACGT GCGCCTTGTC GAAGTGGATG AAGATACCAC CGATCCTGCA GAGTGGGGCA AAAACTGGCC CAAGCAATAC GATGCCTATT TACGCACCGC TGAGGCGACA CGGACGCGTT TTGGCGGTCA TGGCGGCTCT GAAGCCCTGC CGGAGGAAAA GATTGAGCGC GATCCCTGGT TGAAGCGCAT GTTCCTAGGC TATGCCTTTT CCATCGATTA CCGAGACCGC CGTGGACATG CCTACATGCT TGAGGATCAG GAGACCACCA AGCGTCAGAC CAAGCCCCAA TCGGGTTCGT GCATACACTG CCATGCATCG GTGATGCCCC TGTATCGAAA ACTGGGCGAT GGCGATGCTG ATAAAGGATT CGAAAAGACC TTTGCCATGA GTTATCAGGA GACCAATAAA ATGCTTCACG ACATGGGGCA TGCGCATTCG GTTTCCTGCG TGGACTGCCA TTCTCCGGAA AGTATGCAGC TACGGGTGAC CCGCCCCGGT TTCATTCGTG GTATCCAGTC GCTGGCAGAG GGTGATGCCC CTGTGCCTCA TTTGCCGTCT ATCGAGCGGT GGCGCACCGG AGACCGAAAA GAGAAGTACG ACCCCAACAA GGACGCCAGC CGAAACGAGC TGCGCGGTTT CGTTTGTGGT CAATGCCATG TTGAGTATTA TTGCGCCAAC AAGATGCCGC TGACCTTCCC CTGGGGCAAC GGGCTGAAGA TGGAGGACCT CGAGAAGACC TGGGATGAGA CGAAATTCGC GGACGGAGGC CGCTTCTTCG ACTACAAGCA CAAGGAATCC GGCGCCGAGA TTCTAAAAGC GCAACACCCC GAATATGAAC TGTGGAGCCA AGGGATTCAT GCGCGCAGCG GTGTGACCTG CGCGGATTGC CATATGCCCT ACATGAGGGA TGGCGCCACC AAGATTTCCG ACCACTGGGT GCGCAGTCCC TTGCTGAATG TCAATCGATC ATGCCAGACC TGTCATCATT TCCCCGAGGA GGAATTGAAG GAGCGTGTGG ACGCCATTCA GGAACGCAAT TTCAATCTGC TGCAACGGGC CGGCCAGGCA CTGATGGGCC AACTGGATGC CATCGCACAG GCGAAAAAGG CGGGAGCTAC GGAAGAACAA TTGCAACCGT CTTTGGAACT CCAGAGAAAA GCTCAATGGC GGATCGACTA CATTGCAGCC GAAAACTCCA TGGGATTCCA CGCGCCGCAA GAGGCGGCAC GTATTCTGGG CGAAGCTGTG GATTATGCAC GACAGGGGGA AATTGCCGCA CTGAAGTTTA CCAAGGCACC TCGTTAG
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Protein sequence | MESQKDKTKF QIVVISVAVI AAVAAVLIAG LLMNIFERKA EALKPYVRLV EVDEDTTDPA EWGKNWPKQY DAYLRTAEAT RTRFGGHGGS EALPEEKIER DPWLKRMFLG YAFSIDYRDR RGHAYMLEDQ ETTKRQTKPQ SGSCIHCHAS VMPLYRKLGD GDADKGFEKT FAMSYQETNK MLHDMGHAHS VSCVDCHSPE SMQLRVTRPG FIRGIQSLAE GDAPVPHLPS IERWRTGDRK EKYDPNKDAS RNELRGFVCG QCHVEYYCAN KMPLTFPWGN GLKMEDLEKT WDETKFADGG RFFDYKHKES GAEILKAQHP EYELWSQGIH ARSGVTCADC HMPYMRDGAT KISDHWVRSP LLNVNRSCQT CHHFPEEELK ERVDAIQERN FNLLQRAGQA LMGQLDAIAQ AKKAGATEEQ LQPSLELQRK AQWRIDYIAA ENSMGFHAPQ EAARILGEAV DYARQGEIAA LKFTKAPR
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