| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2854 |
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| Symbol | |
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| ID | 3725560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3339351 |
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| End bp | 3342104 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637752464 |
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| Product | putative two component signal transduction protein |
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| Protein accession | YP_358259 |
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| Protein GI | 77920444 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGAT TCGAAGATCC ACAAGACACC ATAAAAAGCA TTCTCCGGCC GGGAAATGTC
TCCGCCGGCG AGGCTTTGCC CACCGACCCC GGACTATTCG ACAATATGAT CCGTCTGCTG
CCGGATCCGA TTTTTTTTAA GAACCTGGAC GGTAGCTATC AGCGCTGCAA TGCCGCCTTT
GAGCAGTTGC TCGGCAAAGA ACGGGCGGAA ATCGTCGATA AAACCGACTA CGATCTGTTT
TTGCCTTCTA TCGCGCATGT CAACCGGCAT AACGATATCT GTCTTTTGAA CGCAGGTCTC
CCTTCCCATC GCTACGAAAC CAGTATTGTC AGCCGGAATG GCAGGCGGCG GGAGGTCATC
ATCCAGATTG CGCTAATAAC CATTGAGGGC GGGCCGACGG GTATCTTCGG CATCATCAAG
GACATCACCG AGCGTAGACG CGCCGAAACC GCCCTGCGGG AGCGCAAAGA CCTGCTGCAT
CGTATTACCG ACAACATGCT TGACCTGGTC AGCGAAGCCG ATCAGCATGG CTTTTTTCGT
TATCTCTCCC CTTCTCACGG GATGGTTTTG GGCTTTGCGC CGGAAGAGTT GGTCGGTACC
TGGCTTTACG ATCTCATGCA TCCGGACGAT CTGGAACGCA TGCGGATAAC CTTTCGGGAT
ACCTTGCCGG CGCTGAAAAT CGTTCGGGCG GAATTTCGCT ATCGCCATGC CGACGGGCAC
TACCTGTGGT TGGAGACCAT CGCCAAATGC ACCACCGATG AACTGAACCG GGTTAACGGG
GCGGTGTTTG CCAGTCGCGA TGTCACGGAA CGGGTCCGGG CGGAAAAAGC CCTGCGCAAC
AACGAAGAGC AGTTGCGGCG CATCACAGAC CATATGCCCG CTCTGGTCAG TGCTGCCGAC
CTGGACGGTC TTTTCACCTA TCTCAGCCCT TCGCATCGAG GTATCCTGGG CTTCGATTAT
GAAGCGCTTA TCGGTACCTG CCTTTGGGAC TGGATGCATC CCGACGATAT GGAGCGCATG
CGCAAGGCTT TTCAGGTCAC CCTCCCCGAA AAGAAAAGGG TGCATGAAGA GTTTCGCTAT
CGCCATGTCG ATGGCCATTA CATATGGTTG GAAACCGTGG CCAAATGCAC CATGGAAGGT
TTGCGTGTCA CCGGTTCAAT CTTCGCCAGC CGCGACATCA CCGAGCGCCG TCGGGCCGAG
ATCGCCCTGC GGGAAGTCAA TCAGACCCTG CAGGCTACCA TCCAGGCTTC CCCGCTGGCG
ATTTTCGTCC TTAACCGGGA GGGATGTATC CAGCTCTGGA ACCCGGCTGC GCGCCAAATG
TTCGGCTGGA CCGAGGAGGA GGTAAAGGGG AAATACTATC GGCTGGCTCC CGACTATCTC
GATCTGGAGT TCAGGCAGAA CCTGGCGCGC ATGAACCGGG GGGAGAAGTT TCACGGCCAG
GAAACCAAGC GCCGGTGCAA GGACGGGACC CTGCTCGATA TCAGCTTTTC CACCGCCCCG
CTTTACGATC AGAAGGGCAG GATTATCGGC ACCGTCGGCA TTCTGGAGGA TATTACCGAG
CGCAAACGTA CGGAAGTCGC CCTGCGGGAA AGCGAGGAGT TATTCCGGCA GATATTCGAG
CAGAATGAAG ACCCGGCGTT TCTGTTCGAT CCCGATACGC TGGCCATCCT CGATGCCAAT
GCCGTAGCGG TGCGCCTCTA CGGTTACAGC AAAAAGGCGT TGCGTGCCGG AGGGCTTAAT
CTGATCATGA AACCGGTGGT ACTGACATCC TTTGCCCGGA AACTCGTGAA GGAACAGGCC
GGTCTCGCGG ACGACGCACC CTGGCGGCAC GTATCGCCCC TGAATACCAT CGCCAGCAGT
GGCAAGGAGG TCATGGCTTC GTTCCGCGGT AGGTTACTGC GTTCCAGGGG ACAGGTGTAT
TTTTACGGAA CTTTCCGTGA TATCACCGAA AAGCTTCGCA TTCGCAAGGA GCGCAGCGAA
ATGCAGGCCA AGCTGATTCA GGCCAACAAG ATGACCGCCA TCGGCACCCT CGCTTCGGGG
ATCGCTCACG AAATCAACAA TCCGAACAAC TATCTGCTCG CCAACGCCCA GTTTCTGGAG
GAAGCCTGGC CCGATATCCA GCATACATTG CAGGAACATG CCGATAGCGA CCCCGATCTG
ACCATCGGCG GCTTGCCCGT GCAGGAAGCT CTCAAGGATA TTCCGCAGTT GTTGCAGAGT
CTTATCGAGG GCTCCCGGCG CATCAAGAAT ATCGTCACCA GCTTGAAGGA TTTTTCCCGG
CAGGATGATG AGTCGACCCG GAGGCCCGTC GATATCAACC GGGTGATCAA TGCCGCATTG
GTGATTCTGG CCAATAAAAT CAAGAAGAGC ACCGATCTTT TCAACTGCAC CCTCTCCGCA
GGGCTGCCGC CGATCATGGG ACACTCCCAG AAGATCGAAC AGGTCATCAT CAACCTGCTC
ATCAACGCCC TGCAGGCGCT GCCGCATCGG CAGGCGGGCG TTTCTCTCAC TACTTCCCTC
CAGGAATCGC CTCGTAGCGT GGTCATCAAA ATTCGCGATC AGGGCACCGG TATACCCGAG
GAAATTCGCG GCCGCATTCT CGATCCGTTT TTCACCACCA AGCATAAGAC CGGCGGTACT
GGCCTCGGCC TGTCGATCTG CTATGCCATC ATCAACGATC ACAAAGGTAG CATCGATTTC
GCTTCCGAAG CCGGAGCGGG GACCACGGTT ACCGTTGTCC TGCCGGTTCT CTGA
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| Protein sequence | MARFEDPQDT IKSILRPGNV SAGEALPTDP GLFDNMIRLL PDPIFFKNLD GSYQRCNAAF
EQLLGKERAE IVDKTDYDLF LPSIAHVNRH NDICLLNAGL PSHRYETSIV SRNGRRREVI
IQIALITIEG GPTGIFGIIK DITERRRAET ALRERKDLLH RITDNMLDLV SEADQHGFFR
YLSPSHGMVL GFAPEELVGT WLYDLMHPDD LERMRITFRD TLPALKIVRA EFRYRHADGH
YLWLETIAKC TTDELNRVNG AVFASRDVTE RVRAEKALRN NEEQLRRITD HMPALVSAAD
LDGLFTYLSP SHRGILGFDY EALIGTCLWD WMHPDDMERM RKAFQVTLPE KKRVHEEFRY
RHVDGHYIWL ETVAKCTMEG LRVTGSIFAS RDITERRRAE IALREVNQTL QATIQASPLA
IFVLNREGCI QLWNPAARQM FGWTEEEVKG KYYRLAPDYL DLEFRQNLAR MNRGEKFHGQ
ETKRRCKDGT LLDISFSTAP LYDQKGRIIG TVGILEDITE RKRTEVALRE SEELFRQIFE
QNEDPAFLFD PDTLAILDAN AVAVRLYGYS KKALRAGGLN LIMKPVVLTS FARKLVKEQA
GLADDAPWRH VSPLNTIASS GKEVMASFRG RLLRSRGQVY FYGTFRDITE KLRIRKERSE
MQAKLIQANK MTAIGTLASG IAHEINNPNN YLLANAQFLE EAWPDIQHTL QEHADSDPDL
TIGGLPVQEA LKDIPQLLQS LIEGSRRIKN IVTSLKDFSR QDDESTRRPV DINRVINAAL
VILANKIKKS TDLFNCTLSA GLPPIMGHSQ KIEQVIINLL INALQALPHR QAGVSLTTSL
QESPRSVVIK IRDQGTGIPE EIRGRILDPF FTTKHKTGGT GLGLSICYAI INDHKGSIDF
ASEAGAGTTV TVVLPVL
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