| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2765 |
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| Symbol | glcD |
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| ID | 3725470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3223407 |
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| End bp | 3224792 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637752374 |
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| Product | glycolate oxidase subunit D |
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| Protein accession | YP_358170 |
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| Protein GI | 77920355 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000000000623644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAAA AACGCATTAT CGCCATTTTG CAGGATATTG TCGGTAAAGA ATATGTCTCC
ACCGAGCAAG CCGACCGCAT TTGTTATTCC TACGACGCCA CACAGCAGCA GTTCAACCCC
GATGTGGTCG TCCGCCCCGC CGATGCCGAG CAGATCAGTC TTATTTTAAA GATGGCCAAC
GCGGAAAAAA TCCCCGTTTA CCCGCGCGGC GCGGCCAGCG GTTTTACCGG TGGCAGCGTG
CCGATCAAAG GGGGGATCGC CCTGGTGCTG ACCCGCCTGA ACCGTATTCT GCGCATCGAC
CAGGACAATC TCATCGCCGA GGTGGAGCCG GGGGTCATCA CCGCCACTCT GCAAAAGGCC
GTCGAAGAGG TCGGGCTGTT TTACCCACCC GACCCGGCCT CCCTGAAATT CAGCACCCTG
GGCGGCAATG TCGCCGAATG CGCCGGCGGA CCGCGCTGTG TCAAATACGG CGTCACCAAA
GATTACGTGC TCGGCATGGA AGTCGTCACT CCCCAGGGGG ATATCATCCG CACCGGGGGG
GAAACCATGA AAGGGGTCGT CGGCTACGAC CTGACCAAGC TGATGGTCGG CTGCGAAGGC
ACCCTGGGGG TCATTACCAA AATCATCCTC AAGCTGATAC CGAAGCCCGA AGCCAAGAAA
ACCATGCTGG TGATGTTCGA TTCCATCGAC GGTGCGGCTC AAGCCGTTTC CAGCATCATT
CGCGGCAAAA TCATCCCCAC CACCCTTGAG TTCATGGATG CCACCGCCCT GGCCTGCGTG
CGTCAGAACG CCGACCTCGA CATTCCGGAC GCCGCCCGGG CAGTGCTGAT CATCGAAGTC
GACGGCGAGC GCGAACTGCT CGAACGCCAG GCCGCCCGGA TTATGGATAT CGCGTCACCG
CTGGGTGTGG TACATACCCG GGTTGCAGTC AGCGACGAGG AAAGCGAGCA GATCTGGCAG
GTACGACGCA GCGTCTCGCC GAGCCTGCGC AAGGTCAACC CCGACAAATA CAACGAAGAC
ATCTGCGTGC CCCGCAGCAA ATTGCCGGAC ATGATCCGGG CCATCGAGGC CATTTCCAAG
CGCCTGGAAA TCCCTATCGT AAACTTCGGC CACGCCGGGG ATGGCAATAT CCATGTCAAC
ATCATGGTCA ACCGTGCCAT CGAAGGCCAC GAAGAGAAAG CCGAGACAGC CATCCGCGAC
ATTTTCGCCA AGACCCTGGA ACTGGGTGGC ACCATGAGCG GCGAGCATGG CGTTGGCACC
AGCAAGGCAC CCTACATCCC CATGGAACTC GATGTGGCCA CGATCGCCTA CATGAAAGCC
ATCAAGCGCG CCCTCGACCC GAACAACATT CTCAATCCGG GCAAAATCTT TCTGGAAGAC
CAGTAA
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| Protein sequence | MLEKRIIAIL QDIVGKEYVS TEQADRICYS YDATQQQFNP DVVVRPADAE QISLILKMAN
AEKIPVYPRG AASGFTGGSV PIKGGIALVL TRLNRILRID QDNLIAEVEP GVITATLQKA
VEEVGLFYPP DPASLKFSTL GGNVAECAGG PRCVKYGVTK DYVLGMEVVT PQGDIIRTGG
ETMKGVVGYD LTKLMVGCEG TLGVITKIIL KLIPKPEAKK TMLVMFDSID GAAQAVSSII
RGKIIPTTLE FMDATALACV RQNADLDIPD AARAVLIIEV DGERELLERQ AARIMDIASP
LGVVHTRVAV SDEESEQIWQ VRRSVSPSLR KVNPDKYNED ICVPRSKLPD MIRAIEAISK
RLEIPIVNFG HAGDGNIHVN IMVNRAIEGH EEKAETAIRD IFAKTLELGG TMSGEHGVGT
SKAPYIPMEL DVATIAYMKA IKRALDPNNI LNPGKIFLED Q
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