| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2513 |
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| Symbol | |
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| ID | 3725215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2955289 |
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| End bp | 2955948 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637752123 |
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| Product | thiamine biosynthesis protein ThiF |
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| Protein accession | YP_357921 |
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| Protein GI | 77920106 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0000000693793 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGTGGCG AGATCAGAGA GGAAAAGGCT GTATATATGG ATTCTCTGGA AGAGGAGTTT
TTCTCAAGGC ATCCGTTAGC GATTGTCCCC ATTTTGAAAA AAGCCAAAGT GGGGATTGCC
GGCGCCGGTG GGCTGGGTTC AAATATTGCG GTAGCACTAG CGCGTTCAGG GGTCGGCAAG
CTCGTTATCG CTGATTTCGA CCGCGTAGAA CCCCATAATT TGAATCGGCA GCAGTATTTC
CTTGACCAGA TCGGCCAATT TAAGATCACC GCATTAAAGG AAAATCTCGA ACGTATCAAT
CCTTTTTCGG AATTTGAAGT CCATGAGGTT TTTCTCGATG CCGATAACAT ACCTCTCATA
TATGACGATG TCGATATCAT GGTTGAGGCC TTCGACAGCG TGGAGTCCAA ACTGGAATTT
CTGGAGACCT GTGTCGAGAA ATTTCCGGGG AGGCCGGTGG TGATGGGTAG TGGTATGGGG
GGGTATGGAA AAAATAATCA GATTTGTGCC AAAAGACTTT TCGACCATGT TTATGTCTGT
GGTGACGGAA AAACCGATGT GGCAATAAAC CCGCCCATGG CACCCAGGGT GGCTATGGTG
GCCGCCATGC AAGCCAATCT CGTGTTGGAA TTGCTGCTCA AGGGTGAGGT CGTTCTTTAG
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| Protein sequence | MCGEIREEKA VYMDSLEEEF FSRHPLAIVP ILKKAKVGIA GAGGLGSNIA VALARSGVGK
LVIADFDRVE PHNLNRQQYF LDQIGQFKIT ALKENLERIN PFSEFEVHEV FLDADNIPLI
YDDVDIMVEA FDSVESKLEF LETCVEKFPG RPVVMGSGMG GYGKNNQICA KRLFDHVYVC
GDGKTDVAIN PPMAPRVAMV AAMQANLVLE LLLKGEVVL
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