| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2492 |
|---|
| Symbol | |
|---|
| ID | 3725194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2930803 |
|---|
| End bp | 2932149 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637752103 |
|---|
| Product | sodium/alanine symporter |
|---|
| Protein accession | YP_357901 |
|---|
| Protein GI | 77920086 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 103 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCCC TGTTGCAACA AGTGGCGGAT GTGGTGTGGG GACCGGTCAC GATCGTCCTG
CTGGTCGGTA CCGGCGCGCT CATGACCGCG CTGCTCGGCC TGGTGCAGCT GCGTCGGTTC
CGCTATGCCT GGCAACTTGT CTCCGGCCGC TTCGACAGCC TCGAGGATGC CGGCGAGATC
AGTCATTTTC AAGCGTTGAG TACGGCTCTT TCGGCCACCA TCGGCACCGG CAATATCGCC
GGGGTCGGAA CCGCCATTGC CATGGGCGGG CCCGGTGCGG TGTTCTGGAT GTGGATCACG
GCAATATTCG GCATGTCACT CAAATTTTCC GAATGTCTGC TGGCCCTTCA CTTTCGCACC
ATCCACAGTG ACGGCACGAT CAGTGCCGGC CCCATGTATT ATCTGGAAAA GGGCTTGGGC
TGCAAATGGC TCGGTCGCCT GTTCGCCCTG TTTGCCGTGC TGGTATCCTT CGGCCTCGGC
AATATGGCCC AGGCCAATTC CGTGGCCGAA CCGGTACGGA CCCTGTTCGG AGTGCCCAAG
CTTTTTACCG GGCTGTTTAT CGGCGGTCTG GTTTTCGCCG TGACTGTCGG TGGCATCCGC
CGCATCGGCA AAGTGGCCAG TTGCCTAGTG CCGTTCATGT CGGCATTCTA CGTGCTGGGG
GCTCTTTTTG TACTGGCCCG CCATTGGCAG GCGATTCCGG CCGGGCTTGT CACCATCGTG
CAAGATGCTT TTTCCGGCAG TGCCGCGGCC GGCGGTTTTG CAGGAGCGGC CGTAGCGCAG
GCGGTGCGCT TCGGCGTTGC GCGCGGCGTA TTCTCCAACG AGGCGGGGCT CGGCAGTGCG
CCTATCGCCC ACGGCGCGGC GCGCACCAAA GAACCTGTGC GCGAAGGCCT GGTCGCCATG
CTCGGCCCCT TCATCGACAC CCTGGTCATA TGCACCATGA CCGCCCTGGT GATCATTCAC
ACCGGCGCCT ATCGCAGCGG CCTGAGCGGC GCCGACCTGA CCGCCCGGGC CTTCGACACC
GGTTTGCCGG GGCCGGGCGG ATACATAGTC GCCATCGGTA TTATATTTTT CGCTTTTTCC
ACCTCCCTGA GTTGGTCCTA CTACGGCGAT CGTTCCGTGG AATACCTGTT CGGAGGCAAA
GTCGTGTTGC CTTACCGGGT GCTGTTCTGC CTGCTTTTGC CGGTAGGCGC TTCCATCCGT
CTCGAACTGG TCTGGATCAT CTCCGATATT TTCAATGCGC TTATGGCCTG GCCCAACCTG
GTCGGTCTGC TCTGGCTCTG TCCCCTGGTG GTACGCCAGA CCCGGATCTA TTTCCGTGAC
CCCGGCCGTA TGTATCCGGA TCATTAA
|
|---|
| Protein sequence | MDALLQQVAD VVWGPVTIVL LVGTGALMTA LLGLVQLRRF RYAWQLVSGR FDSLEDAGEI
SHFQALSTAL SATIGTGNIA GVGTAIAMGG PGAVFWMWIT AIFGMSLKFS ECLLALHFRT
IHSDGTISAG PMYYLEKGLG CKWLGRLFAL FAVLVSFGLG NMAQANSVAE PVRTLFGVPK
LFTGLFIGGL VFAVTVGGIR RIGKVASCLV PFMSAFYVLG ALFVLARHWQ AIPAGLVTIV
QDAFSGSAAA GGFAGAAVAQ AVRFGVARGV FSNEAGLGSA PIAHGAARTK EPVREGLVAM
LGPFIDTLVI CTMTALVIIH TGAYRSGLSG ADLTARAFDT GLPGPGGYIV AIGIIFFAFS
TSLSWSYYGD RSVEYLFGGK VVLPYRVLFC LLLPVGASIR LELVWIISDI FNALMAWPNL
VGLLWLCPLV VRQTRIYFRD PGRMYPDH
|
|---|
| |