| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2366 |
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| Symbol | |
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| ID | 3725068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2783353 |
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| End bp | 2786817 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751977 |
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| Product | two component sensor histidine kinase |
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| Protein accession | YP_357775 |
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| Protein GI | 77919960 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0469089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGTATC CTGCCATTTT TTTATTGAGT AAAAAGGCGG GCATCATCGT GCGTGTTTCT
TGTGATTTTA CAGCAAAGAG TTTGGCAGTG TTGTGCCTGG GAGTTGTTTT GCTGACCGGA
GCGTTGTGTC CCGGCAAGGT GGCAGCCGGT GACCTGAGCC TTCTGGTGCT GCATTCCTAC
CATGCCGAAT ATGCCTGGAC TCGAAATCAG CATGCCGGCT TTGTCGCGGC CCTCAAACAA
GATGCCTCGC AGTACCAGGT GTCTTGTTTT GCCGAATATC TGGACACCAA GCGTAACGAA
TACGACGCAG ATTACGAGGC CTTTTTCGCT GCATATCTGC AAAAAAAATT CCGTGGTTAC
CATCCCGATG CCATTTACGC CACCGATGAC AATGCCCTGG TGTTTTTGAT CCGCTACCGC
GACTGCCTGT TTCCCGACGT ACCTGTCATA TTCAGCGGTA TCAATAACCT GTGGCTAGAA
CAACAGCTGA ATCCGAAGAG CTTCATGGGG GTGTACGAAC GCAAGGATAT TCTCGGTAAT
GTCCGGTTGG CTCTTGCCAT GGATCCGATG CTGAAGAAAA TTTATTTCCT GGGTGACAAC
TGCACTTCCC ACAATCTCAT CGCCAGCCAC ATTGCGGCGG AGATGGGGCG ACACTTCCCC
GATCTCGATT ATGAATTTGT GGCGGATAAA ACCATGTCCG GACTCCGGAG CAAGCTGTCC
GTCAAGGGCG AAGGCACCGT CGTCCTTACG ACCCTGGGCG GACTTCTCGG GCCGGATGGC
GGACCGGTGC CGATTCCGTT GGCGATTCAG ATGTTGTCGG AAGCGGGAAA GTTCAAGATA
TTAACCATGG GCACCAATTA TCTCACCGAC GGTGTCCTCG GCGGGAGCGT GGTCGACGGT
TTTGCGCAAG GGCAGGCTGC CGCCCATGTT TTTATGGATA AGGTACTGGG CCTGGACACC
ATCGGCAAAG AGGGGCCGTT CGAGGTCAAT ACCACCCGGT ATGTTTTCTC GGTTGCGGCT
CTTAAACGCT GGCAGATTCC CCTGAGCATA TTACCCCAAG GCAGTATGCT TCTGGATGGG
ACACCTCAGG TTTTCGGCGT CCGTTCGCAT CTGGTGTTGG GGGGGCTTCT GTTTCTGCTT
CTGCAGATTA TTCTGCTCAT CCTGGTGCTG CCCCGGTTAC GCTCCCTCAA ACTTATTCGT
CAGTCTCTTA CCTGGAGCGA AAAACGCTTT CAAGCTGTGG TCAGGGTGAT CAGCGATGCT
TTGATCGGCG TCAATGAACA GGGGCTGGTG GTGGTTTTCA ACCCTGCCGC CGAAAAGATG
TTCGGTTATA CCGAAGAAGA AATGGTCGGT CAGCCTCTCG ATCGTCTGAT TCCTGAGCAC
CTGCGCGAAC GTCACCGGCA AAACCTGGTG TCTTTTTTTA CCCGAGCCCA TGAATCCGAT
CTACTCGGCC AGAATATCGA ACTGCCCGCC TTGCGCAGCA ATGGCGAGCA GTTTTACGTC
GAGTTGTCTC TGTCGCTGTG GCAGCAAGGG AATAAGTTGA AGGCTATTGC CGGTCTTCGT
GATGTTACCG AGCGTCGGCA GGCCGATGAG GAGTTGCGTC GCAACGAGGA GCGTTACCGG
GCCCTGGTGC AAACCCAGGC TGAAGCGGTG TGCCGCTGGT TACCCGATAC GACCCTGACG
TATGTCAATG AGGCGTATTG CCGTCTTTTT AAAAAAAAGC CTGAGGAGTT ATTGGGACGG
AAGTTCATAG ATCGAATGTC GGAAGAGGTC CGATCCTCCA TGGATGAACA TATCCGGACC
CTGCTGAACA ATCCCGGGAC GCTTTATCAT GAAACCCCTA TCCTTCAGGA TGATGGCAGC
AGCCATTGGT ATCGCTGGAG CAATACGGCC ATCGTGGGGG AACTCGGTGA AGTCACCGAG
GTGCAGGCTG TCGGTCTGGA TATCACCCAG CGCAAAAAAG TCGAAGAGGA TTTGCGCGAA
AGCGAATCGC GGTTCCGGGA TACCGCAGAC CTGTTGCCGC AGTCGGTTTT CGAGACCGAT
ACCCTCGGCC GGCTGACTTT TGCCAATCGG GTCACTTTGG AGATGATCGG CTGCGATGAT
GCTGATCTTC AACAGGGCAT TAGCGTTTTC GATCTGTTGG CAAGCTCGGA CCGCGATGCC
TTGACAGATG CTTTTCAAAG CGTTCTTGGC GGTGAAACGA TCAATGCCAA TGAATGTCTG
ATCGAGGCGC GCAACGGTTT TCGTTTCAAG GTGATGATTT CGGTTTCGCC CATGGTAATA
AAAGGGCGTA TTGTCGGGGT GCGTGGTGTG GCCATCGATA TTTCCGACCG GATTGTGGCG
GAACAGGCTT TGCGCCAAAG TGAAAAGAAG TTCAAACGGT TGTATCGAGA ATACCAGACT
CTTCTCGATG GCATACCCGA TTCTATCGCA TTGATTGCCC CGGATCGCAC CGTGCTGCGG
GCCAATCTGA GTACCGCCAA TATGCTCGGC TATCCCATTC GGGAGATTCC GGGAAAGAAA
TGCTGTACCC TGTGGGGCAA CTGTTCCTGT CATCTGGAAG AGTGTCCGGT GATGGCCAGT
TTCCGTACCG GTGTGCAGCA AAAGGTGGTC TTCAAGACGC AGGACGGTCG CAGCTGGGAG
GTGCGGACTT TCCCCGTCAA GGACAAAGTA GGCAATACGG TGCAGGTTAT TCGCTACACC
AACGATATCA CTCGGCAGAT TCAATTGCGC GAGGAATCCC TGCGTACCGG GCAGCTGGCT
TCACTGGGCG AACTGGCTGC CGGGGTGGCG CACGAAATCA ACAATCCCAT CAACGGCATT
ATCAATTATG CCCAGCTGCT TGCCGACAGT CTCGATATCG AAAAGGATGA TCTGGATATC
CTGCGCGGCA TCATCGAGGA AGGGGAGCGG GTCGCCAACA TTGTACGCAA TCTGCTGGCT
TTTGCCAGGG CCCGCAAGGA GCACAAGGAT CGGGTCGCCC TCTGGGATAC GCTGGCCTGT
TCCCTGGCTC TGACCGAATC GCAGTTGCGC AAGGATGGTA TTCATTTGCA GGTCGAGGTG
CCGCCCGACC TGCCCGAAGT GGTGGCCCAT GCCCAGGAAA TTCAGCAGGT TCTTCTCAAT
TTGTTGAGTA ACGCCCGCTA TGCGCTTAAC AAGAAATATC CGACAGTGCA TCCGGATAAG
ACCCTGCTTA TCAAAGCTTC AACCTGCATG GAGCAGGGAC AGCAGATGGT TCACCTGTCC
GTTCGCGATC AGGGTACCGG CATTCCCGAA AGTTCCCTGC ACAAGATTCT CGATCCGTTT
TATACAACCA AGCCGAGCGG AGAGGGTACC GGGCTGGGGC TGAGCATCAG CCACGGTATC
ATCAAAGATC ACCATGGGGA AATTGTCATC GACAGCAAGG AGGGCCACTA TACGATGGTC
ACCTTCGCTC TCCCCGCAGC ATCAGAGGAA ACCCATGACT CGTAA
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| Protein sequence | MWYPAIFLLS KKAGIIVRVS CDFTAKSLAV LCLGVVLLTG ALCPGKVAAG DLSLLVLHSY
HAEYAWTRNQ HAGFVAALKQ DASQYQVSCF AEYLDTKRNE YDADYEAFFA AYLQKKFRGY
HPDAIYATDD NALVFLIRYR DCLFPDVPVI FSGINNLWLE QQLNPKSFMG VYERKDILGN
VRLALAMDPM LKKIYFLGDN CTSHNLIASH IAAEMGRHFP DLDYEFVADK TMSGLRSKLS
VKGEGTVVLT TLGGLLGPDG GPVPIPLAIQ MLSEAGKFKI LTMGTNYLTD GVLGGSVVDG
FAQGQAAAHV FMDKVLGLDT IGKEGPFEVN TTRYVFSVAA LKRWQIPLSI LPQGSMLLDG
TPQVFGVRSH LVLGGLLFLL LQIILLILVL PRLRSLKLIR QSLTWSEKRF QAVVRVISDA
LIGVNEQGLV VVFNPAAEKM FGYTEEEMVG QPLDRLIPEH LRERHRQNLV SFFTRAHESD
LLGQNIELPA LRSNGEQFYV ELSLSLWQQG NKLKAIAGLR DVTERRQADE ELRRNEERYR
ALVQTQAEAV CRWLPDTTLT YVNEAYCRLF KKKPEELLGR KFIDRMSEEV RSSMDEHIRT
LLNNPGTLYH ETPILQDDGS SHWYRWSNTA IVGELGEVTE VQAVGLDITQ RKKVEEDLRE
SESRFRDTAD LLPQSVFETD TLGRLTFANR VTLEMIGCDD ADLQQGISVF DLLASSDRDA
LTDAFQSVLG GETINANECL IEARNGFRFK VMISVSPMVI KGRIVGVRGV AIDISDRIVA
EQALRQSEKK FKRLYREYQT LLDGIPDSIA LIAPDRTVLR ANLSTANMLG YPIREIPGKK
CCTLWGNCSC HLEECPVMAS FRTGVQQKVV FKTQDGRSWE VRTFPVKDKV GNTVQVIRYT
NDITRQIQLR EESLRTGQLA SLGELAAGVA HEINNPINGI INYAQLLADS LDIEKDDLDI
LRGIIEEGER VANIVRNLLA FARARKEHKD RVALWDTLAC SLALTESQLR KDGIHLQVEV
PPDLPEVVAH AQEIQQVLLN LLSNARYALN KKYPTVHPDK TLLIKASTCM EQGQQMVHLS
VRDQGTGIPE SSLHKILDPF YTTKPSGEGT GLGLSISHGI IKDHHGEIVI DSKEGHYTMV
TFALPAASEE THDS
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