Gene Pcar_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2361 
Symbol 
ID3725063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2774378 
End bp2776861 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content55% 
IMG OID637751972 
Producttwo component sensor histidine kinase 
Protein accessionYP_357770 
Protein GI77919955 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTGA TTTCGTCTTC CGACAATGAT TTCAAGCAGG TTTTTGAAGA TCTGCACTGG 
CAGGACCATG TTTGTCTCGT CTACGATGAC GCCAAGGAGT GGGGGCGGAA TCTGGTGCGG
TTTGTAAAGG CAGGATTGGA TCGTAATCAC AAGTCTTTGT GTCTCATGCC TTCTGGAATG
TTTTCAGATG CCTCTTTGCT GGCACAGGAT GAAGCTCTGC TGCTTCAACA GGCCATAAAA
GATGGTTTGC TGGTGCATTG GCATGATTTC GAGACCTTGC AGCAGATTCT CGAGGAGGGG
CGCTTGCCCG GGATGTTTGT CCCCTCGGGC GGCTCTGATG AAAATGCCGG GTGCCGTCTT
ATCTGCGATA TGACCTGGTT GAAACAATGC GGCGTGCCGG AAAAGAGTCG TCGCGACTTT
TTGCTTTGGA TGAATACGGC AAGCCAGGAT CATCCTTTGT TGGTTTTGAG CGGTTATCAG
CGCCAGGAGT CATCCTCCGC CGAGTTGCGC GAAGCCTTCG GGTTACATCC CTATATCGGT
CATGCCGGTC AACTGTTGCC GGGTGGCTTC AGTGGTTCGA CACGACCGGG TCGTGGCAAT
CGCTTTAACC GGCCGGTACC GGAATGGCGT CGATTCTTTC GCCGAAGTCA GGTGCTGGAT
GCTATTTTCA AGGCAGCTCC TTTCGGCATG TGGCTGCTGG ATCGCAAGAA GGAAATCGTT
TTTGTAAACA AGCAGATGTG CGACATCCTT GGGATGTCGG AGTCGCAGCT CCTCGGCAGG
CATCACCGGG AAATCGGCCG GCATTGGGGG CCTGACAACC CGGCTGTTTT TGCTTTGGAT
GATCCTGCGG TTTATTTGAC GGACGGGGCG GTTGAAAACG AGCAGTCTTG TTGGCAGGTC
GATGGCAACA TGCGGGCTTA TCGCATTATC CGGACACGGG TTACAGGGGA CGATGGGCAA
GTGGAAGGTT TGCTCGGCCT GGCTGTGGAC ACGACGGATT GCAAAAAGGC CGAACGGTTG
CTTCGACAGG AGGAGCGGCG GTTCCGCGAT ATCGCTCTGA GTGTCGGGGA TCTGATTTGG
GAGGTCGGGC CCGACTGGCG GTTTCGTTAT GTCTCCGAAC GCGCCAGCAG TATCCTGGGT
TACAAGGCCG ATGCGCTGAT CGGGAAGTCC CTGGCTGAAC TGGACAATGC GGCTGCCGCA
GAGGCCTGGC AGGTTCTGTT CCGGGACTGG GAGGAAAATC CGAAGACTTT CCGCAACGTG
GAAAAGTGGT TACAGCACAA AGATGGCCGC CGAAGGTGTC TGATGCTGAG CGGTCTTCCG
ATTATCGAGG ACGATGGCAG CGCCGGTGGC TTTCGCGGTG TGGCCGAGGA TATTACGGAA
CGTAAGCAGC AGGAGGACAA CCTTAAAAAG GCCTTGTGGG AAGCCGAGGA TGGTCGGGAT
AAAATCGATA GCATTATCCG CTCCATTACG GATGCACTGG TTGTTATTGA TGATCGTCAG
CGGGTGATCC TGCTCAATCC GCGTGCCGAG GCGTTGTTCG GTGTCACTGC GGCACATGCT
GCCGGATGTC TTTTAGGCGA GCTTTGTCCG GACGCTGAAG TGCAAAACGT TATCATGACA
TTATTGGAGA ACCTGACGGA CGGGGGGGGC GAAGCCTGCT TTGCGTGGCC AGGCGGCGAC
AGTACGAGTC CGGATTATTT CAAGGCCCGG GCTTCGCGCA TGCGCAACAT TCAGGGCGAC
GGTACCGGGG CGATTGTCAT TTTCCATGAT GTGACGCAAG AACGTGAGAT GGAGCGGGTC
AAGACAGAGT TTATTTCCAC TGCGGCCCAC GAACTGCGCA CTCCGCTGAC CTCCATTATG
GGGTATCTGG AATTCTGCAT GCACCCGGAG GAGTTCGGAG GTTTTTCAGA TGCTCAGCTT
AAAGAGTTCA TGACCGAGAT TTATGACAAG GCCGAGGTGT TGGAGCGGAT TGTTTCCGAT
TTGCTCGATA TCAGTCGCAT GGAAGCGGGC CGTGAAATTC CTCTGGTTTT GGAAACCGTC
GATGTGGCGG AAATCAGCCG CAAGCTTCTG CAGCATTTCC AGTTGCAATT CCCCCGTTAT
CGTTTTGAAA TGGAATTCGC TGCAGGGACC TCGCATCTGG TCAGGGCGGA CCGGGAAAAG
CTGGTGCAGG TCATGGAAAA TATCATCAGC AACGCGATAA AGTATTCCCA GGAAGGTAAA
GCGGTGAGAG TGATCGGCAG ATGCGAGCCG AAATGTTACC GCATTTCTGT CAGAGATCAG
GGCATCGGCA TGACGCCAGA GCAGATCGAG CGCATGTTCG ACAAGTTTTA TCGTGCCGTC
GATCTCAACA GCGGGGTACG CGGCCTCGGG CTCGGCATGC ACATCGTCAA ACACATCATT
GAACGCCACG GAGGCGGTAT CGAAGTTGTC AGCGCTCCCG GGGCCGGGAC CGAAATCATT
TTCAGCCTGC CTCTATGTGA ATAA
 
Protein sequence
MTVISSSDND FKQVFEDLHW QDHVCLVYDD AKEWGRNLVR FVKAGLDRNH KSLCLMPSGM 
FSDASLLAQD EALLLQQAIK DGLLVHWHDF ETLQQILEEG RLPGMFVPSG GSDENAGCRL
ICDMTWLKQC GVPEKSRRDF LLWMNTASQD HPLLVLSGYQ RQESSSAELR EAFGLHPYIG
HAGQLLPGGF SGSTRPGRGN RFNRPVPEWR RFFRRSQVLD AIFKAAPFGM WLLDRKKEIV
FVNKQMCDIL GMSESQLLGR HHREIGRHWG PDNPAVFALD DPAVYLTDGA VENEQSCWQV
DGNMRAYRII RTRVTGDDGQ VEGLLGLAVD TTDCKKAERL LRQEERRFRD IALSVGDLIW
EVGPDWRFRY VSERASSILG YKADALIGKS LAELDNAAAA EAWQVLFRDW EENPKTFRNV
EKWLQHKDGR RRCLMLSGLP IIEDDGSAGG FRGVAEDITE RKQQEDNLKK ALWEAEDGRD
KIDSIIRSIT DALVVIDDRQ RVILLNPRAE ALFGVTAAHA AGCLLGELCP DAEVQNVIMT
LLENLTDGGG EACFAWPGGD STSPDYFKAR ASRMRNIQGD GTGAIVIFHD VTQEREMERV
KTEFISTAAH ELRTPLTSIM GYLEFCMHPE EFGGFSDAQL KEFMTEIYDK AEVLERIVSD
LLDISRMEAG REIPLVLETV DVAEISRKLL QHFQLQFPRY RFEMEFAAGT SHLVRADREK
LVQVMENIIS NAIKYSQEGK AVRVIGRCEP KCYRISVRDQ GIGMTPEQIE RMFDKFYRAV
DLNSGVRGLG LGMHIVKHII ERHGGGIEVV SAPGAGTEII FSLPLCE