| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2344 |
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| Symbol | ntrY |
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| ID | 3725036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2741670 |
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| End bp | 2743928 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637751945 |
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| Product | two component signal transduction histidine kinase |
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| Protein accession | YP_357753 |
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| Protein GI | 77919938 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000619377 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAAC TACCCAGCGA TCCGGAAAAA AGCAGCAAGG AAACCCGCAA ACGACGCCGG
GAATGGCTGC TCATCGGCCT CATCACCATA CTGGTGATCG TCTTTTCCAA ATTCGAAACG
CAATTGTTAC AATTTACCGC TCAGGTTCCC CTGGCCAAAA GCCTGCTGGT GCTGGCACTG
ATCAACCTCA ATATCCTGTT GATCATCCTT ACGTTGTTCC TGGTTTTTCG TAATGTGTTC
AAACTTCTGC TGGAACGACG ACGCCAGGTT CCAGGAGCAC GCCTGCGAAC CCGCCTGGTG
GTAGCCTTTG TTACCCTTTC GCTGGTGCCC ACCTTGCTGC TGTTCTTTGT GGCAGCCGGT
TTCGTATCCA ACTCCATTGA AAATTGGTTC AACGTCCAGA TCGAAACATC GCTGCACGAA
TCCCTGGAGG TGGCACAGAC CTATTATAAA AACTCCGGCG CCAATGCCCT TTATTACGGC
GATCAGCTGG CGCGCTTCAT CAAAGACCAG AAACTGCTCA ACGAAAAAAA CCTTCCGCAA
CTGCGAGCCC TGATTCAAAA TAAACAACAG GAGTATAACC TTGGCGTCGT TGAGGTCTTT
TCCTCAACCC ACGAAGAACT GGTGCGTGCC TCAAACCCCC AGGTTCCCAT CGCCGAATTC
ACAGATCCCG GCAGCGATGC CATACGCGAG GCCTTGCAGG GCAACCGATT TTCACGCATC
ACCAATATCG GCAAAGCTGA CCTGATAAGG GGAATCGTAC CGGTTTTTTC CAACTGGAAC
CCCAACGATG TCGTGGGGGT GGTAGTGGTC AACTATTATG TTCCGTACTC CCTGGTCAAT
AAAATGAAGG AAATTTCCTC CTCCTTCGAA CAATATAAAA CCACCAAACT TCTCAAGGAC
CGTATCCAAA AAGGCTACAT ACAGGTGCTG CTGATTATCG CCCTGGCCAT AGTGTTTCTG
GCTACGTGGT TCGGCTTCTA TCTGGCGCGC ACCATTACCG TCCCTATTCA GGAATTGGTT
ACCGCAACCA ACCGGGTTGC CAGTGGCGAT CTGACCGTCC AGATTGCCCC CCAAAGCGAT
GATGAAATCG CATTGCTTGT CGAAGCATTT AACAAAATGA CTGCCGACCT GCGAAAAAGC
CAGGCCGGAA TCAACAATGC CAACCGTCAC TTGCGAGCCT CCAACCAGGA ACTGGATCAA
CGCCGCCGCT ACATGGAAAT TGTCCTGAAA AATGTTACCG CTGGTGTCAT TTCCGTAGAT
CGCCAGGGGA ACCTTACCAC CATCAACAAA TCAGCCGAAC AACTTTTGAA GATCATCACA
AGCAAGGTCA TCGGTCGTCA TTTTCGCCAG GTTCTCAATC CAGAACATCT GGCTATTATC
AACGGACTGT TACGCGAACT TGCCAAATCC GGCAAAGACT CCATCCATAA ACAAGTTTCC
ATTCCCCTGG AAGACACAAA ACTCACCCTG CTGGTCAACC TGACCACTTT GCGAGATGAA
AACGGGGAGT TTATGGGCAC CGTAGTCGTA TTCGATGATT TGACTCACCT TATCAAAGCT
CAGCGTATGG CTGCATGGCG TGAGGTTGCT CGTCGCATTG CTCACGAGAT CAAAAACCCC
CTCACCCCGA TCAGACTATC CGCCCAGCGC TTGAGACGCC GTTATCTCGA CCGTTTTCCC
GAAGATGACA GGGTCTTTGA CGATTGCACC GATATGATTA TCAAGCAAGT CGACGAGCTT
AAAATTCTGG TGGATGAATT TTCCAATTTT GCGAAAATGC CATCGGCCAA CCCAACGCCC
AACAACCTTA ACGACATTAT CAACGAAACG CTGATCCTCT ATCAGGAAGC CCACCGCCAG
ATCTGTTTTT CGTTTCATCC CGATAACGAG ATCCCTGTCT TCAATCTCGA CAGGGATCAA
ATTAAACGTT CAATCATCAA CATGCTTGAA AATGCCGTAG GCGCCATGGC CGATGACGGT
GGGCACATTT CTCTGGAAAC GCATTACAAC CGCGAAATGA AAATGGCCAG CATCTTTATA
ATCGACGATG GATGTGGTAT TCCTACGGAA GACAAACCAC GCCTTTTTGA ACCCTACTTT
TCGACAAAAA AATCGGGAAC AGGTCTGGGC CTGGCCATCG TGGCAACCAT TGTTGCCGAT
CATAACGGCT ATGTAAGGGT CAAGGATAAC CAACCGAAGG GGACCAAGTT CATCATTGAA
TTGCCAGTTA CCGGCATCAC CAGAGAGACA GAAGCCTAG
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| Protein sequence | MPQLPSDPEK SSKETRKRRR EWLLIGLITI LVIVFSKFET QLLQFTAQVP LAKSLLVLAL
INLNILLIIL TLFLVFRNVF KLLLERRRQV PGARLRTRLV VAFVTLSLVP TLLLFFVAAG
FVSNSIENWF NVQIETSLHE SLEVAQTYYK NSGANALYYG DQLARFIKDQ KLLNEKNLPQ
LRALIQNKQQ EYNLGVVEVF SSTHEELVRA SNPQVPIAEF TDPGSDAIRE ALQGNRFSRI
TNIGKADLIR GIVPVFSNWN PNDVVGVVVV NYYVPYSLVN KMKEISSSFE QYKTTKLLKD
RIQKGYIQVL LIIALAIVFL ATWFGFYLAR TITVPIQELV TATNRVASGD LTVQIAPQSD
DEIALLVEAF NKMTADLRKS QAGINNANRH LRASNQELDQ RRRYMEIVLK NVTAGVISVD
RQGNLTTINK SAEQLLKIIT SKVIGRHFRQ VLNPEHLAII NGLLRELAKS GKDSIHKQVS
IPLEDTKLTL LVNLTTLRDE NGEFMGTVVV FDDLTHLIKA QRMAAWREVA RRIAHEIKNP
LTPIRLSAQR LRRRYLDRFP EDDRVFDDCT DMIIKQVDEL KILVDEFSNF AKMPSANPTP
NNLNDIINET LILYQEAHRQ ICFSFHPDNE IPVFNLDRDQ IKRSIINMLE NAVGAMADDG
GHISLETHYN REMKMASIFI IDDGCGIPTE DKPRLFEPYF STKKSGTGLG LAIVATIVAD
HNGYVRVKDN QPKGTKFIIE LPVTGITRET EA
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