| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2204 |
|---|
| Symbol | murD |
|---|
| ID | 3724896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2575636 |
|---|
| End bp | 2576988 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637751805 |
|---|
| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| Protein accession | YP_357613 |
|---|
| Protein GI | 77919798 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 81 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGT ATAGCGGAAA ACACGTGGTT GTTGTCGGTG CGGGATGCAC CGGGCTGGGC
CTGGCAAGGT TTTTTCTCGA CCGCGGCGCC CTGGTGACCC TGTCCGACAG CCGCAGCCGC
GAAGAACTCG TCGATGTGGC GGAACTGGCC GATCATGGTC TGCGCTTCGA TTGCGGCGGC
CACGATGCCG CATTGCTGGC CGGCGCCGAT CTTATTGCCA TCAGCCCCGG AATTCCGTTG
ACGGTGCCGG CGGTGGCGGG GGCCTTGCAG GCCGGAGTGC CGGTCCAAGG CGAGATCGAG
ATCGCCGCCA GGGAATTGAG TGCGCCGATG GTTGCCATAA CCGGTACCAA TGGCAAATCG
ACCACCACCT GTCTGATGGG GGAAATCATG CGCTGCTGGG GGCGCCGTGC ATTTGTCGGC
GGCAATCTCG GTACGCCTCT GATCGAGGCG ACACGGAGCA CCGACTGGGA CTGGATTGTG
GCCGAAATCT CGTCCTTTCA ACTCGAGGCC ATCGATACGT TTCGACCGCG CTACGGCATG
TTGCTGAACC TCACTGCGGA TCATCTCGAT CGGTACGCCG GCATGGGCGA GTATGTGGCG
GCCAAACTCC GGCTGTTTGA AAACATGACG GCCGAGGATG TGGCGGTGGT CAACGCCGAT
GATGCGCTGG TGGTGCGGTC CACAACCGAT TTGCCCTGTC GCAAAATTCC GTTTTCCTCC
AGTCGTGTGC TTGACGAAGG CATGGGATTC GATGGCCAGC ACATCGTCTG GCGGCACGCG
GGGCGGCAGG AACGTTTCGA TGTCGCCGAT CTGCAACTTA AAGGGCTGCA TAATGTGGAG
AACGTCATGG CGGCCTTGAT TCCACCGTTA ATGGAAGGAT GCCCCACCGA TATCGCATGG
AAGGCGGTAT GCGGTTTTAG CGGTCTCGAT CACCGCATGG TCCTGGTCAG GGAAATCGAC
GGTGTGAGCT GGTACGACGA TTCCAAGGGA ACTAACGTCG GCAGCGTCGT AAAAAGCCTG
GCGGGACTTC AGGGCCCCGT CACCCTGATT GCCGGCGGTA AGGACAAAGG CGGCGACTAT
GCGCCCTTAG CGGGCCTGAT CGGGGAGAAG GTCGAACATC TGATCCTTAT CGGCCAGGCG
GCCGACCGGA TGCAGGCTGC TTTTCAGGGC ATGACGACGA TTCTGCGGGC CGATTCCCTC
GAAGCCGCGG TGCAGCAGGC CCAACAGGTG ACGATGGCCG GCGGGACAGT GCTGCTGTCT
CCCGGTTGTT CGAGTTTCGA TATGTTTCGC AGCTATGCCG AGCGCGGCGA GGTGTTCTGC
CGTGCGGTGC AGGCTTTGCA GGGGAATGGT TGA
|
|---|
| Protein sequence | MAEYSGKHVV VVGAGCTGLG LARFFLDRGA LVTLSDSRSR EELVDVAELA DHGLRFDCGG
HDAALLAGAD LIAISPGIPL TVPAVAGALQ AGVPVQGEIE IAARELSAPM VAITGTNGKS
TTTCLMGEIM RCWGRRAFVG GNLGTPLIEA TRSTDWDWIV AEISSFQLEA IDTFRPRYGM
LLNLTADHLD RYAGMGEYVA AKLRLFENMT AEDVAVVNAD DALVVRSTTD LPCRKIPFSS
SRVLDEGMGF DGQHIVWRHA GRQERFDVAD LQLKGLHNVE NVMAALIPPL MEGCPTDIAW
KAVCGFSGLD HRMVLVREID GVSWYDDSKG TNVGSVVKSL AGLQGPVTLI AGGKDKGGDY
APLAGLIGEK VEHLILIGQA ADRMQAAFQG MTTILRADSL EAAVQQAQQV TMAGGTVLLS
PGCSSFDMFR SYAERGEVFC RAVQALQGNG
|
|---|
| |