Gene Pcar_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2163 
Symbol 
ID3724855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2521923 
End bp2523140 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content60% 
IMG OID637751764 
Producthypothetical protein 
Protein accessionYP_357572 
Protein GI77919757 
COG category[S] Function unknown 
COG ID[COG1915] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00300] conserved hypothetical protein TIGR00300 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000106153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCGC AGCATGTCAA ACTTGAGGGA CACATTATCG ATCAGCCGAT CCTTTCCCGG 
GTACTCGACA CCGTGGAACG TTTCGGTGGG TGTTACGAAA TTGTCGAATT GGATATCGGC
ACAACACGCA AAGCTGAGAG CCGGGCGCTG CTTTGCGTTA AGGCGGATGA TGAAGCGACG
CTTCAATCGG TATTGCAGAA TCTGGCGTTG CTGGGAGTTG AGCCCGTGAT GCCGATACCG
GCGAAATGGG AAGATGCTCC GGCCGATGGG GTATTGCCGG ATCGCTTCTA TGCCACAACC
AATCTCCCCA CGGAGGTTTT CGTCGAAGGC CGCTGGCTTT CGGTAACCGG TCAGGAAATG
GATCTGGCCA TTGTGCTTGA CGAATCGATG CAAAGGGCGT GGACCGTGCC CATGGCCGAC
GTCAGGGCGG GGCAGAGGGT GGTGGTGGCA ACCGAAGGGG TGCGTGTCAG TTATCCTCCG
CGCCAACAGG ACAGCACCGG TTTCCGTTTT ATGGAGAGTG CCGTCTCGGC AGAAAAACCC
AAACGGCCCT TGTTGCAGCG GATCGTTGCC ACGGCGCGCC GGATCAAGGC CGAAGGTGGC
AAGGTCCTGC TGGTCGGCGG CCCGGCGATT ATTCATACCG GTGCCGGACC GGTACTGGAA
AAACTTATTC GGGACGGTTG GATCGATGTA CTGTTCGCCG GTAATGCGTT GGCGGCTCAC
GATATCGAGG CCGCCCTGTA CGGTACCTCT CTTGGCGTGC CTGTCGAGGG CGGTCCGCCG
GGTGGCGAAG GCCATGCCCA CCACTTATGG GCCATCAACC GAATCCGCAG GGCCGGTTCC
ATCGCCGGGG CCGTGGAGCT TGGCAGCCTG ACCAAAGGGG TGATGCATGC CTGCATAAGC
CGGTCGGTAC CTTTTGTGTT GGCCGGTTCG ATTCGCGACG ACGGTCCTCT GCCCGATGTG
ATTACCGATA CCCTGACGGC CCAACGTGCC ATGCGTAGCC ATGTCCAGGG TGTTGGGATG
GCCATTATGG TCGGCACCAC CCTGCATGCC ATCGCCACCG GCAATCTTTT GCCTGCCGGT
GTCGTAACCG TGTGCGTCGA TGTCAACCCG GCGGTCGTCA CCAAACTGCA GGACCGCGGC
AGCCGTCAGT CCCTCGGTAT CGTCATGGAC GCTGCCTCGT TTCTTGAATA TCTGGCGGAT
GGGCTGGGGC AACGGTAA
 
Protein sequence
MPAQHVKLEG HIIDQPILSR VLDTVERFGG CYEIVELDIG TTRKAESRAL LCVKADDEAT 
LQSVLQNLAL LGVEPVMPIP AKWEDAPADG VLPDRFYATT NLPTEVFVEG RWLSVTGQEM
DLAIVLDESM QRAWTVPMAD VRAGQRVVVA TEGVRVSYPP RQQDSTGFRF MESAVSAEKP
KRPLLQRIVA TARRIKAEGG KVLLVGGPAI IHTGAGPVLE KLIRDGWIDV LFAGNALAAH
DIEAALYGTS LGVPVEGGPP GGEGHAHHLW AINRIRRAGS IAGAVELGSL TKGVMHACIS
RSVPFVLAGS IRDDGPLPDV ITDTLTAQRA MRSHVQGVGM AIMVGTTLHA IATGNLLPAG
VVTVCVDVNP AVVTKLQDRG SRQSLGIVMD AASFLEYLAD GLGQR