| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2157 |
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| Symbol | |
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| ID | 3724849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2515330 |
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| End bp | 2516370 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637751758 |
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| Product | hypothetical protein |
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| Protein accession | YP_357566 |
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| Protein GI | 77919751 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.000787973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATAG GGTTTACGAT CACTGGCAAC TCGAGGGGAA TTTCGCTGAT CGAAATGATG
ATAGCGATGC TTATAGGCAT GTTGTTACTC GGGGGAGTAT ACCGGATATT TATCAGTACT
ACGACCTCCT ACCGATTTGA GGAGGAACTG TCCAATTTGC AGGAGAACGG GCGCTTTGCC
ATGGAGTTCT TAACCCGTGA TACACGACAG ACCGGATACA GAGGCTGTGC GGGGAGCGGG
GTATCGGTAA CCAATACCCT GAATGCCGGA GCCGGAGCCC TGTTTGATTT CGATCGTGCG
GTAGAAGGTT ATGACGATGT TGCCGATCCG AACGCGGCCG ATTTTGTAGC TATGGGTATT
ACACCCATAA TCGGTTCAGA TGTTCTTATT CTCCGCAAGA TGGATAGTGA TGTGATGGTA
GAAATCGTCG AGCAGATGCC CGATACCTCC GCCGACATTA AGATCACCGG TGGGATTAAT
CCGGCCCCGA TTGCCGATTT TGATATCGTC ATGGTCTCCG ATTGTCAGGC TGCAGCGGTA
TTTCAGGTCA CGAATTATAC CGACGGTGGT GGGTCGATTA AAGCAGACGT TGTTCATAAC
TCCGGGGTTG GTTCCCCCGG CAATGCGACC AAGGATCTCG GCCATTCCTT CGGGCCTGGG
GCCGAAATCG CTAAAATGAC CACCTATGTC TATTTTATTG GTACGAATGC CGATGGCGAG
CCCGGTCTTT ATTATAAGGT TAGTTCTGGG GTAGCACAGG AGATTGTCGG TGGTATCGAA
TCGATGCAGA TTACCTATGG CATCGACGCC GATAGCGATC GCGATATCGA TAGTTATGTA
ACGGCTGCCG GGGTTGCGGA TTGGGCAACG GTTCTGGCTG TACGCGTCGG CTTACTCGTG
GCGAGTATGG ATGAAGTTCT TCGTGGCGAA GTCGATGCAG CAGCCTATAC GTTAAATGGA
ACGAATATCG CGGCTGCTAA TGATCGTCGC TTGCGCCAGG TCTTTACTAC GACTGTGGCT
CTGCGCAACC GTTTACCCTG A
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| Protein sequence | MPIGFTITGN SRGISLIEMM IAMLIGMLLL GGVYRIFIST TTSYRFEEEL SNLQENGRFA
MEFLTRDTRQ TGYRGCAGSG VSVTNTLNAG AGALFDFDRA VEGYDDVADP NAADFVAMGI
TPIIGSDVLI LRKMDSDVMV EIVEQMPDTS ADIKITGGIN PAPIADFDIV MVSDCQAAAV
FQVTNYTDGG GSIKADVVHN SGVGSPGNAT KDLGHSFGPG AEIAKMTTYV YFIGTNADGE
PGLYYKVSSG VAQEIVGGIE SMQITYGIDA DSDRDIDSYV TAAGVADWAT VLAVRVGLLV
ASMDEVLRGE VDAAAYTLNG TNIAAANDRR LRQVFTTTVA LRNRLP
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