| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2139 |
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| Symbol | |
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| ID | 3724831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2491293 |
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| End bp | 2492072 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637751740 |
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| Product | prepilin peptidase |
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| Protein accession | YP_357548 |
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| Protein GI | 77919733 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0000194698 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCTT ATTCGGTTGG TGCGGTGGTT TTCCTTTTTG GAACCGTAAT CGGGTCTTTT
CTCAATGTTT GTATTTATCG GGTTCCTCAT GGATTGTCCG TGATTTCACC TTCCTCCCAT
TGTCCTCAAT GCAAGACGCC TATTCGTTGG TATCAAAACA TTCCGATTTT CGGTTATTTA
TTTTTGCGTG GGCGTTGTGC CTCCTGCGGG GTCGGTATTT CCATACGTTA TCCCATGGTT
GAGGTTTTAA CAGGTGTCTT GTTTGCTTTG GTGTGGCATG ACCTCAGCGG TCTATTTGTG
ATCCCTGTCT ATTGGTTGTT TGTTGCCTCC ATGGTGACGA TCTCCTTTAT TGACTTGGAT
CATAAAATTA TTCCGGATGT TATCAGCTTG CCGGGGATCG TTCTCGGATT CCTTCTATCT
TTCGCCGTTC CTTGGTTAAC CTGGCAGGAT TCCATTTTGG GTATACTCTT AGGTGGAGGG
AGTCTCTATC TCGTTGCGAA GGTTTACTAT TGGATGACTC ACGTCGAGGG AATGGGTGGC
GGAGATGTTA AGTTGCTTGC CATGATCGGT GCCTTTCTTG GATGGAAAGC AATTCTGCCT
GTCATTTTTC TGGGTTCGTT ATCCGGAGCC TTGGTGGGGG TTCCCCTTAT GTTATATAAA
CGGGCCGGTG GAAAACTAGC GATTCCGTTT GGACCATTTT TGGCTACTGG AGCCGTTATT
TACCTGCTTT TGGGGGAACA GCTCATCCAA TGGTACATTT CTTTTGCCTT TCCTGAATAA
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| Protein sequence | MDSYSVGAVV FLFGTVIGSF LNVCIYRVPH GLSVISPSSH CPQCKTPIRW YQNIPIFGYL
FLRGRCASCG VGISIRYPMV EVLTGVLFAL VWHDLSGLFV IPVYWLFVAS MVTISFIDLD
HKIIPDVISL PGIVLGFLLS FAVPWLTWQD SILGILLGGG SLYLVAKVYY WMTHVEGMGG
GDVKLLAMIG AFLGWKAILP VIFLGSLSGA LVGVPLMLYK RAGGKLAIPF GPFLATGAVI
YLLLGEQLIQ WYISFAFPE
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