Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2025 |
Symbol | |
ID | 3724716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2355417 |
End bp | 2357258 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637751627 |
Product | two component sensor histidine kinase |
Protein accession | YP_357436 |
Protein GI | 77919621 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.199641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCAGA CATGCTGTGA AGACGGATTT CCTTTGATGG ATGATGGGTG TGCCATTGTT CCTCCGGATC TCACATTGAA AAAATATCAG GCTCTTGCCG AGGCGTTCGG CGGGGTCGTC TACGAATTGA ATCATCCCGG GGGACGACTT GACTGGTCTG ATCAGTGCTG GAGAATGTTC GGCATTACCA GGGAGGAGAT GGGCAGCGAT ATCCAAAGTT GGCTTGTGCA TATTCATCCG GAGGACCGTA CCCATGCTTT CAAGGAAATG CATCGGACGC TGCGTTCCGG GCAACCAACG CAGCTCGAAT ACCGTGTGCA GCATCGCGAC GGCCATTATG TGTGGGTGCA GGACTACAGT TATGTCTGTT GCCGCGGGGC AAACGATGTC TGTCATATCG TCGGATATCT GCAGAATATA TCCGATACCA AAAAACATCT GAACGACCTT GACCTGGCGC GCAGGGCCAT CGATTCATCA ATAAACGCGA TCGCTTTTAC CGATCTCGAG GGGTGTTTGT CGTATGTCAA CCGGTCGTTT GTCAGGATGA TGGGCATTGA CAAACCGGAA ACGGCTATCG GGCGGCAGGT CGGCACCCTG TGGAAAAACC CCAAAAAGGC CCGAGTGGTT TTACGCAATT TGCAGAAATT CGGCGAATGG AGCGGAGAGG TCGCGGCTTT GCGTCCGGAT GGCCTTTTGG CATATTTCGA GGTTTCCGCC CATGTGGTCG AAGATTCCGG CGGGCATCCG CATTGTTACA TGGCCTCGTT TGTCGATGTA ACTGAACAAA AGAAGGCCGA ACAGGAAGTG CAGGAGTCGG AGGAAAAGTA CCGTCTGTTG TTTTCCTCCT GTTCGGATGC CATTGTTATT TTTGATGCCG GATCTTTACG CATTGTCGAT GTCAATGGCG CAGCGCTCGA TCTGTACGGC TATACGCGTG ACGAGTTTCT CGCTTTGGAC GTGTTGGATT TGAGCGAAGA ACCGGAGCAA AGCCGGTTGC GCATGCAACA GATTATCAGC GGCACGCTGC GTCATTTCCC CTTGGTCAGT CATCGTCGAA AAGACGGCAC CCGCGTCGAT GTCGAGGTGT CGGTCGGATC TTTCAGTTGG CAGAAACGGC AGGTGTTTGC AGGTTTTTTC CGGGATGTCA GCGAACGCCA GCGAATCGAA GAGCTTAAGG ATGACATGTT GTCGTCCGTC AGCCATGAAA TGCGTACGCC CCTGACGGCC ATCATGGGGT TTACCGACTA TCTTTTGAAA TCGAATGACA GGCCGGAACG GCAGAAGGAT TATCTGAGTA TCATCCAGCA GCAAAGCGAA CGGCTGAAAG AACTGGTGGA AAATCATCTC AACCTGCAAA GGCTGCGTGC CGGGCACGGG GTCGGCGCCA TTCACCCTGT CGAAGTGTTG CCCCTGTTGC ACGGTGTTTC CAATATGTTT TCTTCGGCTC GCGGTCGAGA CCGCATCCGG ATTCAGTGCC CGGAGGATTT GCCGCCGGTG CGTGGTGATG AAAACCAGCT TTATCGGGCA CTGTATAACT TGTTGTCCAA TGCCATTAAA TATTCGTCGG AGGATCAGGA GATTCTTCTG GGGGCCCGAC GAGCCGACGA TGCTGCGGTG CTTTTCGTCA AGGACCAGGG CGTGGGGATC CCGAATGAAC ACCAGGCTAC CATATTCGAC CGATTCTTCC GGGTACCCGC CGGGGATCAC GGTATGCGCG GTAGCGGATT GGGGCTCTCG CTTGTGCAGG AAATTATCAA AGCGCACAAT GGCCGCATAT GGTTGGACAG CGTTCCCGGG CAGGGCAGCT GCTTCTATCT TAAGTTACCG TTGTTCGGTT GA
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Protein sequence | MSQTCCEDGF PLMDDGCAIV PPDLTLKKYQ ALAEAFGGVV YELNHPGGRL DWSDQCWRMF GITREEMGSD IQSWLVHIHP EDRTHAFKEM HRTLRSGQPT QLEYRVQHRD GHYVWVQDYS YVCCRGANDV CHIVGYLQNI SDTKKHLNDL DLARRAIDSS INAIAFTDLE GCLSYVNRSF VRMMGIDKPE TAIGRQVGTL WKNPKKARVV LRNLQKFGEW SGEVAALRPD GLLAYFEVSA HVVEDSGGHP HCYMASFVDV TEQKKAEQEV QESEEKYRLL FSSCSDAIVI FDAGSLRIVD VNGAALDLYG YTRDEFLALD VLDLSEEPEQ SRLRMQQIIS GTLRHFPLVS HRRKDGTRVD VEVSVGSFSW QKRQVFAGFF RDVSERQRIE ELKDDMLSSV SHEMRTPLTA IMGFTDYLLK SNDRPERQKD YLSIIQQQSE RLKELVENHL NLQRLRAGHG VGAIHPVEVL PLLHGVSNMF SSARGRDRIR IQCPEDLPPV RGDENQLYRA LYNLLSNAIK YSSEDQEILL GARRADDAAV LFVKDQGVGI PNEHQATIFD RFFRVPAGDH GMRGSGLGLS LVQEIIKAHN GRIWLDSVPG QGSCFYLKLP LFG
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