Gene Pcar_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2005 
SymbolispE 
ID3724696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2336577 
End bp2337419 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content56% 
IMG OID637751607 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_357416 
Protein GI77919601 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000192369 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCT TTCTGGCACC GGCAAAAATC AATATCTGTC TGCATGTGCT CGGGCGGCGT 
GAGGACGGTT ATCATGAACT GGCCATGCTC ATGCAAAGGG TCTCCCTGTA TGACAGGATA
AGCCTCTCTT TTATCGAAGG CAACGACATC CGTGTGCAGT GCGACGGGCT GACGTTGCCA
TTGGGCCAGA AAAATATAGC GGCTCGCGCA GCGCAAGCAC TTTTTGATCG TGCCGGCATC
CGTCGAGGAC TGGATATAGT CATCGAAAAG AATATTCCCG TTGCCGCGGG CCTGGGCGGC
GGATCGTCAG ACGCCGCGAC CGTGCTGATG GGCCTGAACG ATATGCTCGG ATTGGGTCTG
TCCGCTACCC AGCTCATGCA GGAAGGTGTG AAGCTGGGAG CCGACGTTCC GTTTTTCATC
TACAAACATC CCGCCTGGGC TACCGGTATC GGTGACAAAT TGCAGGAAGT CGAAGGCTTG
CCTCCGGTCT GGTACGTGCT GGTCAATCCC GGGCTCGAGG TTTCTACCGC CTGGGTTTAT
CAAAATTTGC GGTTGACATC GGCGAGGGAT AATCTTAGAA TACCTCGATT TTCCGGCACG
GTAGACGAGG TCGTCGAGTT GCTTCACAAT GACCTTGAGA CCGTAACGGT CGAGCGTTTC
CCGCTTATCG GCGAAATCAA GCAGCAGTTG CTTGGTCTCG GTGCGCGGGG TGCCCTGATG
AGCGGTAGTG GTTCAACGGT ATTCGGGGTG TTCAGCGATG GCGATACGGC CAGGGCTGCG
GCCGAGAACC TTTCGTCTCG GTCGGGGTGG CGCGCTTTTG CCGTGGAACC GGTTAACGAT
TGA
 
Protein sequence
MESFLAPAKI NICLHVLGRR EDGYHELAML MQRVSLYDRI SLSFIEGNDI RVQCDGLTLP 
LGQKNIAARA AQALFDRAGI RRGLDIVIEK NIPVAAGLGG GSSDAATVLM GLNDMLGLGL
SATQLMQEGV KLGADVPFFI YKHPAWATGI GDKLQEVEGL PPVWYVLVNP GLEVSTAWVY
QNLRLTSARD NLRIPRFSGT VDEVVELLHN DLETVTVERF PLIGEIKQQL LGLGARGALM
SGSGSTVFGV FSDGDTARAA AENLSSRSGW RAFAVEPVND