Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2001 |
Symbol | hppA |
ID | 3724691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2332045 |
End bp | 2334069 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637751602 |
Product | membrane-bound proton-translocating pyrophosphatase |
Protein accession | YP_357412 |
Protein GI | 77919597 |
COG category | [C] Energy production and conversion |
COG ID | [COG3808] Inorganic pyrophosphatase |
TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0591536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGC AAATGCTTGC TAAGCTTGCA CCGATTCTCG GTGCGGTAGG GTTTGTGATC GCCATTGTTA TTTACAATGT GGTCAAGGCG CAGCCTGTCG GCAACGCGCG GATGAAAGAG ATCTCGGATG CCATTCATTC GGGCGCCATG GCTTTTCTCG GTCGTGAATA CCGGGTTCTG TCTGTCTTCA TCGTCCTGGT TTTCTTCCTG ATTTTCATGG GCATGGGCAA GCAGACCGCG TTGGCTTTCG TCGGCGGTGC GATCTGTTCC ATGATCTGCG GTTTTATCGG CATGAAGGCT GCAACTCGAG CCAACGTGCG TACCACTGAA GCGGCTCGCC AGTCCGGACA GGCCAAAGCA CTGCTGGTTT CTTTCAACGG CGGCGCTGTT ATGGGGCTGG CCGTTGCTTC TCTCGGCCTG GTCGGTGTCG GCCTGGCCTT TATTTTCTTT GGTGGCGATG CCGAAACCGC CAAGTACATC AACGGTTTCG CCATGGGCGC ATCGTCCATC GCGTTGTTTG CCCGCGTGGG TGGCGGTATC TATACCAAGG CCGCTGACGT TGGTGCCGAC CTGGTGGGTA AGGTTGAAGC CGGTATTCCT GAGGATGACC CTCGCAACCC CGGTGTTATC GCGGACAACG TCGGTGACTG TGTTGGCGAT ACGGCCGGTA TGGGTGCGGA TATCTTCGAA TCCTATGTCG GTTCCATTAT AGCTACCATC GCTATCGCCG CTGCTGCCAG CCCTGCATTG CTCGCAAAAC TTGGCGCCGG TGATAATGTC CAGGCAAATG CGATGATGTT GCCCCTGGCC ATGGCCACCA TCGGTCTGGT GTTCTCCTTG ATCGGTATCG GTTCCATGAA ATTCCTGAAG GGGATCAATC CTGCCAAGGC GCTGCACTAT ACGACCTTTG TCGCTGCAGG TGGCTTCCTG GTTGCGGCTT ATTTCCTAAT CCAGGCTTTC GGTCTCAACG TCGGTATTTT CTGGGCTATC CTGGCCGGTA CCCTCTCCGG TGTTGCGATT GGTCAGATCA CCGAGTACTA CACCGCTTCC AGCCCTGTTT CGCGCATCGC TGAAGCCAGT AAGACCGGTC CTGCCACCAA TATCATTCAC GGTCTGGCTG TTGGCCTGGA AAGCTGCGCC TTGCCTGTCC TGATCATCTG TCTCTCCATT TTCGTTGCCA ATTATTACGC AGGGCTTTAC GGCATCGGTA TCGCCGCTGT CGGCATGCTG GCCACGGTCG GTGTTACCAT GACCGTTGAC GCTTACGGTC CTATCGCCGA CAACGCCGGC GGTATCTCCG AGATGTGCGG GCTTGGTCCG GATGTGCGTA AGATTACCGA CGGACTGGAC TCCATCGGCA ATACCACTGC TGCTATCGGT AAGGGTTTTG CCATCGGTTC CGCCGCATTG ACCGCCTTGG CTCTGTTCTC CGCTTACGCC ACGACTGTCG GTCTTGAGGC TATTAACCTC ATCAATCCTA AAGTTGTGAT CGGATTGCTG ATCGGCGGCA TGTTGCCTTT CTTTATCGGT GCCCTGACCA TGACCAGTGT CGGGCGTGCT GCCGGAAAGA TGGTTGACGA GATTCGTCGT CAGTTCCGTG AAATTCCCGG GCTTCTCGAA GGCAAGCCCA GCGCCAAGCC GGAGCCGGAA AAATGTGTCG ATATCTCGGC ACGTGCCGCT CTGCGTGAAA TGGTTCTTCC CGGCATGGTT GCCGTTATCG CTCCGGTACT CGTCGGTTTC GTTATCGGCA AGGAAGCGCT CGGCGGCATG TTGGCCGGTG CCACGCTGGC TGGTGTTTTG TTGGCCCTGA TGATGTCCAA TGGCGGCGGT GCCTGGGATA ATGCCAAGAA ATATATAGAG AAGGGCGATC TCGACGGCGA AGCTAAGGGC GGCGATGCGC ACAAGGCTGC CGTTGTCGGC GATACCGTCG GCGACCCGTT CAAAGATACT TCCGGTCCGG CCATGAACAT TCTCATCAAG CTGATGAGCG TCGTGTCGCT GGTAATCGCT CCTCTGCTGG GCTGA
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Protein sequence | MELQMLAKLA PILGAVGFVI AIVIYNVVKA QPVGNARMKE ISDAIHSGAM AFLGREYRVL SVFIVLVFFL IFMGMGKQTA LAFVGGAICS MICGFIGMKA ATRANVRTTE AARQSGQAKA LLVSFNGGAV MGLAVASLGL VGVGLAFIFF GGDAETAKYI NGFAMGASSI ALFARVGGGI YTKAADVGAD LVGKVEAGIP EDDPRNPGVI ADNVGDCVGD TAGMGADIFE SYVGSIIATI AIAAAASPAL LAKLGAGDNV QANAMMLPLA MATIGLVFSL IGIGSMKFLK GINPAKALHY TTFVAAGGFL VAAYFLIQAF GLNVGIFWAI LAGTLSGVAI GQITEYYTAS SPVSRIAEAS KTGPATNIIH GLAVGLESCA LPVLIICLSI FVANYYAGLY GIGIAAVGML ATVGVTMTVD AYGPIADNAG GISEMCGLGP DVRKITDGLD SIGNTTAAIG KGFAIGSAAL TALALFSAYA TTVGLEAINL INPKVVIGLL IGGMLPFFIG ALTMTSVGRA AGKMVDEIRR QFREIPGLLE GKPSAKPEPE KCVDISARAA LREMVLPGMV AVIAPVLVGF VIGKEALGGM LAGATLAGVL LALMMSNGGG AWDNAKKYIE KGDLDGEAKG GDAHKAAVVG DTVGDPFKDT SGPAMNILIK LMSVVSLVIA PLLG
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