Gene Pcar_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1997 
Symbol 
ID3724667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2329060 
End bp2330016 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content56% 
IMG OID637751598 
Producthypothetical protein 
Protein accessionYP_357408 
Protein GI77919593 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATTG CACAAAAGGC TTTACCTGCT GCATTGGCCG TGACCGCAAC GCTTGGCATC 
CAGATGTTGG TGTTGGCGGC CATATCACAG GGGCAAAGCG GTTTGCTGGT TTTGTTCGGT
AGTGTGCTGG CATTCGTCAT ACCATGGCCT GCGGCATTGT TGCTGCTTCG CCAAGGCGTA
GTCAGTGCGG TCGTCGCCGT ATCCGCCTGT GCATTATTGC TGGGCGCTAT CGGCGGCGCG
GCGCTCGGCG GCGCCTACCT GATGCAGTTT GGGGTAGGCT CCGTTGTGGT GCCGCTACTG
CTGAAAAAAT CCTGGCACTG GGATGCCGCC GTCCTGGCCG GAACCGGTTT TTCCGTGGCT
GGCGGATTAA GCATTCTCAG TGTGTACGCA TTTCGGCTCG GACAGTCCCC CCTCGCTTTT
GCGGACGGTT GGGCCCGAAC CGAGGTTGAT CGAGCGCTTA CCGCGCTCAA GCAGGCCGGT
TTGCCTGCCG ATGTCGCTCA GCAGACGGAG AAAGTGCTGG GGGAGGTTGG CAGCAAGCTT
GTGGCACTGT ATCCTGCCAT TACCGTTCTG ACGGTTGCCG GTATGCTTCT GGTGCTGGTG
CTGTTTCTCA ACCGGCGGGC AGGGGATATA TTGCCTGTGC AGGTTCCCTT CGGTAGCTGG
AAAGTGGCGG AGAATCTTAT ATGGGTTCTC ATAGCCAGCG GAGCTGGTGT GTTGCTTTTT
GAAGGGGCAG GGCACCGATT CGCATTGAAC GTGCTGGTGA TTGTGGCCGC TATTTATTTT
TTGCAGGGAC TGGCCATAAC AAGTTACTTT CTTACCGTTA AAGGGGTGCC CCCGGCATTC
CGGATACTTG GCTATTTTTT GGTTGTTGCG AGTCTCCCGT TACGGGTGCT TGCAACCGGG
GTTGGAATTT TCGATCTCTG GATCGATTTT CGAAAGCCCA GAAACCGCAA GGATTAG
 
Protein sequence
MSIAQKALPA ALAVTATLGI QMLVLAAISQ GQSGLLVLFG SVLAFVIPWP AALLLLRQGV 
VSAVVAVSAC ALLLGAIGGA ALGGAYLMQF GVGSVVVPLL LKKSWHWDAA VLAGTGFSVA
GGLSILSVYA FRLGQSPLAF ADGWARTEVD RALTALKQAG LPADVAQQTE KVLGEVGSKL
VALYPAITVL TVAGMLLVLV LFLNRRAGDI LPVQVPFGSW KVAENLIWVL IASGAGVLLF
EGAGHRFALN VLVIVAAIYF LQGLAITSYF LTVKGVPPAF RILGYFLVVA SLPLRVLATG
VGIFDLWIDF RKPRNRKD