Gene Pcar_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1950 
Symbol 
ID3724640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp2268366 
End bp2269022 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content54% 
IMG OID637751551 
Productiron repressor, putative 
Protein accessionYP_357361 
Protein GI77919546 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACT CGGAACGGGC TGAAGATATT CTGGAAGCCG TCTGGATAGC CGTGGTTGAA 
GAAGGGGATA ATTCGGCTTC CCTTGAGGCT TTGGATGTGG AAGCCCGGGA ACCGGCTTTG 
ATGGATCTGG AACGCCAGGC TCTGATCGAA GTCAAGGGCG AGAGGGTTTA TCTGCGCTCC 
GAAGGGCGTA TCGCCGGGGA AAAGGTTGTG CGGCGACACC GATTGGCAGA GCGTTTGATG 
ATGGATATTC TCGACCTCAA GGGCAGCAAT GCCAACGCCA AGGCGTGTGA ATTCGAGCAT 
TTACTCAATG AGGGTGTCGA TACCCGTATT TGCACCTTGT TGAACCACCC TACAACCTGT 
CCGCATGGCA GGCCCATTCC TCTCGGTGAA TGTTGCCGGG CTGCCCGTCA CGCGGCGGAG 
GTCGGGGTGG TTCCTTTGAC CGAAATGAAA GTCGGTCAGA AAGGCGAAAT AGCCTATCTG 
ACGACCAGCG ATGCCAAGAA GATGCAGAAG CTCATGTCTC TTGGTGTTTT GCCGGGCAAC 
GACATATGCC TCAATCGTCG ATTCCCCTCG TATATTTTTC ATGTGGGAAA TTCCGAATTC 
GCCGTTGATG AGCAACTGGC TCGGGAAATA TTCATCCGCA CCGATGTTGC CGAGTGA
 
Protein sequence
MENSERAEDI LEAVWIAVVE EGDNSASLEA LDVEAREPAL MDLERQALIE VKGERVYLRS 
EGRIAGEKVV RRHRLAERLM MDILDLKGSN ANAKACEFEH LLNEGVDTRI CTLLNHPTTC 
PHGRPIPLGE CCRAARHAAE VGVVPLTEMK VGQKGEIAYL TTSDAKKMQK LMSLGVLPGN 
DICLNRRFPS YIFHVGNSEF AVDEQLAREI FIRTDVAE