Gene Pcar_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1948 
Symbol 
ID3724638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2263507 
End bp2265648 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content57% 
IMG OID637751549 
Producthypothetical protein 
Protein accessionYP_357359 
Protein GI77919544 
COG category[S] Function unknown 
COG ID[COG5276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTTCA AGACTCATAG ATTACGACTC ATTGCCGGAC TCTGCGGATT GTGTTATCTG 
GCTCTGTTCA CCTTTCTGCT GCTGAGCATA TTTAAACCGA CTCCGCAACA GGACGATTTT
ACGGTGAGTT CCGTAAAACG AAAAAAGGGT CGCGGCGTCG CAGAGAATTC GCTGGTCCTG
AGAGGGCAGG GATTCTCCGA GGATATGCAG GCGCTTTTAA ATTACGATAT CGGCAATCAC
TATGCCATTG TCGGCAGTAT GCCCAGTTGG GGGATTGCGA AAAGTGTTGC GGGCAAGGGC
AACCTTGCTT TTGTCGTCGA CACGGTGCGT GGATTGCAGG TTGTCGATGT GGCGATTCCC
GAGCAGCCTG TCATTATCGG TTCCCTGCCG ATTCCAGGGA AGGCCTGGGA CCTGACCGTA
CATAACGATC GCGTTTATAT CGCCGCTTCA CAAGGCGGCA TTCATGTGGT TTCCGTGGCG
CAACCGTCAA ATCCGTATAT TATTGCTTCC GTTGCTACGC CGGGTTGCGC CCTCGATGTG
TGGGTCGAGG ACGACTGGGC TTATGTCGCG GATGATCTCA AAGGTGTGCA GGTCGTTGAT
CTGCGTGGCA CACCGCGCAT TACAGCAAGC GTGGCTACGC CCGGGTCGGC ATCCGGCCTA
TGCAAGGTAG GCAGTTATCT CTACGTCGCT GACGATGCAG CCGGTTTAAG CATATTTGAT
TGCTCTTCAA ACGGGCCACC GTCGCTGGTC GGCACAGTGG ATACTCCCGG TTATGCTACC
GGCGTTACGG TTCGCGACGG CAAGGCCTAT GTGGCCGATC GCAGAGGCGG CATTCAGATC
GTTTCGGTGG TCGATCCTTG CTCCCCGGAA ATTTTGGCAA ATATGCCGAC GTTGGGGCAG
GCCCGGAGCG TTAAATGGAT CGATGGGCGA TTATGGGTCG CTACCGACCA TGGCGGCGTA
CAGGTTTTTG CCCCGACGCA AAAGCACGGC TTGCGCCTGC TTGGCATTGT CGATACCCCG
GGCGTGTCCT GGGATATGAC GTTAACCGGG CGGCATATCA TGGTGGCTGA CGGCAAGAAA
GGTGTGCAGA TTGTTGCACT GGACCGACTT TCCCCGATGG CACCGCCCAA GGCTTTGAAT
GCTGCTGGGG TTGCCCAGGG ACTTGCCACC CGCGGGCGTT ACATTTATGT GGCGAACGGT
GCTGCCGGGT TGCAGATCCT CGTCAACGAG CAGCGGCACT TGCGTCTGAT CCGGACTGTC
GATACGCCCG GCAAGGCCAT CGATGTGTCG CTTGGTGACG ATCGGGCGTT TGTGGCAGAC
GGCTTGGGTG GTTTGCATGC GGTGAAGCTT GACGACACGA AGAGTAAAAT CGCCGAGACC
CTTTCGTTTG AGGGCAAAGT AAACCGGGTT GTCTATCAGC GACAGAAACT GTTTGTGGGG
CAGCGGTGCG GTACCCTGCA TATTGTGGAT GCCCATCCGC ATAACACGAT GCGCTTGCGC
ATGTCGCTGG CGGTTCCCGA TCCTTTGCTC GATATTGCGG TGGCGGGAGA TTATGTATAT
CTGGCCTGTG GCAGTGCCGG TACCTTCGTG GTCGACGTTC GTCACCCCGA TAAAGCGGCA
GTGGTCGGTA AGCTTCCCGT ACCGGATTAT CTGTTGCCGT TTTGTCATGC GACCTCATTG
TCGGTGGCAG ACAACCAACT TTATGTCGCC AACGGTCGAG CCGGCACCCA GGTTTATGAT
TTGACCCGGG CCGACAAACC ACAGCTCCTC GGTTCCGTGG GAACGCCGGG CTATGCCGCG
GCTCTGGTCG CATCCGGAGA CTACGTGTAT GTGGGGGATG TGCAGGCGGG TTTGCAGGTG
GTCGATAGCC GTATTCCGAA CAGCATGCAG GTGTTGGGAG GATTGGGGAT CAGCATCAAG
GCCAAGAAAA TGCTTCTGAT GGGGGACGAG TTGCTTGTGT CGTCGAGCCT CGGCGGGGTG
GTGGCGCTAC CGCTGCCTTT GAAAGTGCCG CATATCAGAC GGCACGGTTC GAGACAGCTG
GAGGTGGAAT TGCCTGCGTT GCCCCGGGCC GGTAATTATT CCCTGTGCCT GTCCGACGGC
CATAAAAATA TGGTTTTGCC CAATGTCGTG TCGTCGGACT GA
 
Protein sequence
MHFKTHRLRL IAGLCGLCYL ALFTFLLLSI FKPTPQQDDF TVSSVKRKKG RGVAENSLVL 
RGQGFSEDMQ ALLNYDIGNH YAIVGSMPSW GIAKSVAGKG NLAFVVDTVR GLQVVDVAIP
EQPVIIGSLP IPGKAWDLTV HNDRVYIAAS QGGIHVVSVA QPSNPYIIAS VATPGCALDV
WVEDDWAYVA DDLKGVQVVD LRGTPRITAS VATPGSASGL CKVGSYLYVA DDAAGLSIFD
CSSNGPPSLV GTVDTPGYAT GVTVRDGKAY VADRRGGIQI VSVVDPCSPE ILANMPTLGQ
ARSVKWIDGR LWVATDHGGV QVFAPTQKHG LRLLGIVDTP GVSWDMTLTG RHIMVADGKK
GVQIVALDRL SPMAPPKALN AAGVAQGLAT RGRYIYVANG AAGLQILVNE QRHLRLIRTV
DTPGKAIDVS LGDDRAFVAD GLGGLHAVKL DDTKSKIAET LSFEGKVNRV VYQRQKLFVG
QRCGTLHIVD AHPHNTMRLR MSLAVPDPLL DIAVAGDYVY LACGSAGTFV VDVRHPDKAA
VVGKLPVPDY LLPFCHATSL SVADNQLYVA NGRAGTQVYD LTRADKPQLL GSVGTPGYAA
ALVASGDYVY VGDVQAGLQV VDSRIPNSMQ VLGGLGISIK AKKMLLMGDE LLVSSSLGGV
VALPLPLKVP HIRRHGSRQL EVELPALPRA GNYSLCLSDG HKNMVLPNVV SSD