Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1911 |
Symbol | ilvD |
ID | 3724601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2227067 |
End bp | 2228737 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637751512 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_357322 |
Protein GI | 77919507 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA AACGTAGCGA GGCCATTACG CAAGGTTTTG AAAGGGCACC TCATCGTGCC TTATTGATGG GTACCGGTAT CCCCCGCAAG GAATTGGGTA AGCCCCTGAT CGGGATTGCC ACCTCCTTTA CCGATCTGAT CCCGGGTCAC ATCGGCATGC GCGACCTGGA ACGGTTTATT GAAAAGGGCG TTCATACCGG AGGCGGGTAT TCGTTCCTGT TTGGCATCCC CGGCGTCTGT GACGGTATTG CCATGGGGCA TAAGGGGATG CATTATTCTC TGTCGACCCG TGAATTGATT GCCGATATGG TCGAGTCCAT TGCCGAGGCG CACCGTCTCG ACGGCTTGGT GCTGCTGACC AATTGCGATA AAATCACTCC CGGCATGCTG ATGGCCGCTG CGCGCCTCGA TATTCCCTGT ATCGTGGTGA CGGCCGGTCC CATGCTTACC GGAACCGGTC GCGGTGGTCG TCGGTATTCT TTTGTGACCG ACACCTTCGA GGCCATGGCA CGCTACAAAG CCGGGGAGAT CAACGCTGCG GAATTGCAGC AGTGCGAAGA CCGTGCATGT CCTGGTGCCG GCTCCTGCCA GGGGTTGTTT ACCGCCAATA CCATGGCGAT TCTCACCGAG ACGCTGGGGA TGAGCCTTGT TGGCTGCGGT ACGGCCCTGG CTGTTTCTTC TTTGAAACGG CAGATTGCCT TCGCTTCCGG CGAGCGGATT GTCAGTCTGG TGCGCGAGGG CATAACGCCC CGGCAGATTC TGACGCGCGA AGCCTTTGAA AACGCCATCC GGGTTGACTT GGCCCTGGGT GGTTCCAGCA ATACCGTGTT GCATCTGCTG TCCATCGCTC ATGAAGCCGA AGTCGATTTG CCGCTTGATC TGTTTGACAA GCTCAGCCGT GAAACGCCGC AACTTGCCTC CATGAATCCC GGCGGCAAGC ATTTTATGGA GGACCTCGAT GCGGCTGGCG GCGTGCCCGG TGTGCTTTAC CAGTTGCGCG ACCAGATTCA CGATAATCCC ACCCTCAATG GCGTCGGTGT GAAGCAGATT ATCGATAGCG TTATCGATGT CGATGAAACG GTTATCCATC CTAAGGAAGA TGCCGTGCGC CCAGAGGGCG GAATCGCCAT TCTGACCGGT AATCTTACTC CCGATGGAGC AGTTGTCAAA CAATCCGGCG TATCCGAAAA AATGATGACC TTCGAGGGGA CTGCCCGGTG TTTCAATTCC GAAGAAGAAG CCATGCAGGC GCTGATGGGC GGACAGGTGA AAGCCGGCGA TGTGGTTGTT ATCCGTTATG AAGGTCCCAA AGGCGGCCCC GGCATGCGTG AAATGCTGGC ACCTACGGCC ACCCTTATGG GGTTGGGGTT GGGTGACAGC GTTGCGCTGA TTACCGACGG GCGTTTTTCA GGCGGTACGC GCGGCCCCTG TGTCGGTCAC GTTTCGCCCG AAGCGGCGGT CGGCGGTCCC ATAGCCCTGG TGGAGGATGG CGATACCATT GTGTTGGATA TTCCTTCCCG GCGTCTGGAG GTTAAAGTCT CCGATCAGGA ACTGGCCAAG CGTCGTGAGC GCTGGCAGGC GCCCGAGCCT AAAATCAAAA AAGGCTGGCT GTCCCGCTAT GCTTCTGTCG TCACGTCGGC CAATACCGGT GCCGTCTGTA AGGCACGCTG A
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Protein sequence | MKGKRSEAIT QGFERAPHRA LLMGTGIPRK ELGKPLIGIA TSFTDLIPGH IGMRDLERFI EKGVHTGGGY SFLFGIPGVC DGIAMGHKGM HYSLSTRELI ADMVESIAEA HRLDGLVLLT NCDKITPGML MAAARLDIPC IVVTAGPMLT GTGRGGRRYS FVTDTFEAMA RYKAGEINAA ELQQCEDRAC PGAGSCQGLF TANTMAILTE TLGMSLVGCG TALAVSSLKR QIAFASGERI VSLVREGITP RQILTREAFE NAIRVDLALG GSSNTVLHLL SIAHEAEVDL PLDLFDKLSR ETPQLASMNP GGKHFMEDLD AAGGVPGVLY QLRDQIHDNP TLNGVGVKQI IDSVIDVDET VIHPKEDAVR PEGGIAILTG NLTPDGAVVK QSGVSEKMMT FEGTARCFNS EEEAMQALMG GQVKAGDVVV IRYEGPKGGP GMREMLAPTA TLMGLGLGDS VALITDGRFS GGTRGPCVGH VSPEAAVGGP IALVEDGDTI VLDIPSRRLE VKVSDQELAK RRERWQAPEP KIKKGWLSRY ASVVTSANTG AVCKAR
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