Gene Pcar_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1885 
SymbolaroA 
ID3724575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2198609 
End bp2199904 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content58% 
IMG OID637751486 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_357296 
Protein GI77919481 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000156974 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA ATCAGGTAAT AAAACCCGGC GGCCGATTGG TTGGCGAAGT GCAGGTTCCC 
GGAGATAAGT CTATTTCGCA TCGGGCCATT ATGCTTGGTG CGCTGGGTGA GGGTGAGACC
GTGGTGCGCG GGCTTTTGCG CGGCGAGGAT AATTTAGCCA CTCTGGAGGC CTTTCGATCT
ATGGGCGTGG CTTTCTGCGA GGATGGCGAC GGCGCGTTGC GTATTGCCGG TCGCGGTTTG
CATGGTTTGC AGGAACCTCA GGACGTTATC GATTGCGGCA ATTCCGGAAC CACCATGCGT
TTAATGACCG GCCTGTTGGC GGGCCAGCAG TTTTTCTCGG TTATGACGGG CGACCGGTTT
TTACGTAAAC GCCCCATGAA GCGCGTGGTT GGCCCTTTGA CCGCAATGGG CGCTCATATT
CTGGGTCGGG CCGGCGGTGA ATATGCGCCT TTGGCATTGC AGGGGAAAAC ACTGCAGGGA
ATCACCCATC ACTCTGCCGT TGCCAGCGCG CAGGTCAAAT CCGCCTTGCT GCTGGGTGGA
CTTTACGCCG AAGGCCCGAC GACGGTCCAC GAGCCCCATC GTTCCAGAGA TCACAGCGAA
CGCATGTTGA CCTGGTTCGG TGCCGATGTC AGGCCCTTTG AAGGCGGCGT GACCCTGCAT
CCCGGTTCTT GTCTTAAAGG GGGCGAGGTT ATAGTGCCCG GGGATATCTC TTCGGCAGCC
TTTTTTATGG TGGCTGCATT GATCGTGCCC GGCTCCGAAC TCCTGATACG ACAGGTAGGG
GTTAATCCGA CCCGCAGTGG TGTTATCGAT ATCCTTCGTC AGATGGGCGG CAACATCGAA
CTGCTCAACG AGCGCGACTG CTCCGGCGAA CCGGTCGCCG ATATCCTGGT TAAGGCAAGT
GACCTTAAGG GTGTCGAAAT CGGTGGCGCC GTGATCCCTC GTGCCATCGA CGAGTTCCCT
GTTATCAGTG TTGCAGCCGC TTTTGCCGAA GGCCGGACCG TGATTCGTGA TGCCAGGGAA
TTGCGCGTCA AGGAGACCGA TAGAATCGCA TCCATGTGTT CGCAAATGGG GGCACTCGGT
GCTCTGGTGG AGCCGCGGGA GGATGGCATG GTGATCACCG GCGGACCTTC TCTTGGCGCA
GCTAAGGTCA GTTCCCTGGG CGACCATCGT ATCGGCATGA GTATGGCGGT GGCGGCATTG
CGCGCCTCCG CTCCGGTAAC CGTTACCGAT ACTGAATGTA CGGCAACCTC TTTTCCCGGT
TTTTGGGAAC TCTTCAACAG TGTTCGGGAA CATTAA
 
Protein sequence
MSENQVIKPG GRLVGEVQVP GDKSISHRAI MLGALGEGET VVRGLLRGED NLATLEAFRS 
MGVAFCEDGD GALRIAGRGL HGLQEPQDVI DCGNSGTTMR LMTGLLAGQQ FFSVMTGDRF
LRKRPMKRVV GPLTAMGAHI LGRAGGEYAP LALQGKTLQG ITHHSAVASA QVKSALLLGG
LYAEGPTTVH EPHRSRDHSE RMLTWFGADV RPFEGGVTLH PGSCLKGGEV IVPGDISSAA
FFMVAALIVP GSELLIRQVG VNPTRSGVID ILRQMGGNIE LLNERDCSGE PVADILVKAS
DLKGVEIGGA VIPRAIDEFP VISVAAAFAE GRTVIRDARE LRVKETDRIA SMCSQMGALG
ALVEPREDGM VITGGPSLGA AKVSSLGDHR IGMSMAVAAL RASAPVTVTD TECTATSFPG
FWELFNSVRE H