Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1765 |
Symbol | |
ID | 3724454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2062505 |
End bp | 2064640 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637751369 |
Product | hypothetical protein |
Protein accession | YP_357178 |
Protein GI | 77919363 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.17317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAACT CGCAGGATAG AGAAAACCTG GTAAGCCGCC TGTCCGAGAT CGATACAAGT CTGTTGCCTC CGGACGGTGG CGATCGCTAT AACCGACTTA TTTTCGAAAG CAGCCCTTAT CTTCTGCAAC ACGCCACCAA CCCCGTCGAC TGGCACCCGT GGGGCCAACA AGCCTTTGAT CTGGCCCGGG AGCAGAACAA ACCGGTGCTG GTTTCCATCG GCTATTCCAC CTGCCACTGG TGCCATGTCA TGGAACAGGA ATCCTTTGAG GATCGCGAAG TCGCCGAGGT TCTGAACAAG CTTTTCATCC CCATCAAAGT CGATCGCGAA GAACGCCCCG ATATCGACAA CCTCTACATG ACAGCATGTC AACTCGTCAC CGGTGGAGGC GGTTGGCCGC TGAATGTCTT CCTGACGCCG GACAAGGCAC CTTTTTATGC CGCAACCTAT ATGCCGCGCC GACCTCGGGG GCAGATGCCG GGTATCATCG CCATCCTGAC CAAGATCGGC GCCATGTGGC AATCCGATCG TGACCAGCTT CTTCAAACCG GGCGGGAAAT CGGCGAGACC CTGATACGCC TGGAAAGCAG CGCTGCCCCT GTCGCATCTT CCCTTACCGA GGCGCCTCTC ACCGAGGCTT TTGAACGATT CAAGGCAAAT TTCGACCATG AACGCGGCGG ATTCGGAAAA GCCCCCAAAT TCCCCATGCC GCACAATCTT TCCCTGCTGT TTCACATTGC CCAACGTTTC GGCCAGGAAA CGGCCGAAGC CATGGCCATC AAAACGCTGC AGCATATCCG ACTCGGAGGT ATGTACGACC ATATCGGCTT CGGCATGCAC CGCTACTCTG TCGATGCTTT CTGGCGGGTA CCGCATTTCG AGAAAATGCT CTATGACCAG GCATTGGTAA CGCTGGCCGC CCTCGATGCT TATCAGGTCA CCCACGATAC CTTTTTCGAA AGCCTTGCAG ATCAGACCAT GAGTTACGTT CTGCGCGATC TGAGTCTGCC CGAAGGAGGC TTCTGCTCCG GCGAAGATGC CGATACCGAA GGTGCCGAGG GAACTTTTTA CCTGTGGACT CCGCAACAGG TCGAAGAGGT CCTCGGACAC CAGCAGGCCA CCATCTTTTG TACCTGCTAC GAAATCTCCG AGGCGGGTAA TTTCGAAGGC AGCAACATTC CTCGCCTCGA AATGGACCTG AAAGAATGGG CCCAGTGGTT CGGCACCGAT ACGGATGAGC TGGGTGCCGT GCTGGAAGAC GGCCGGCGCA AACTGCTTCA GGCCCGCAAA TTGCGCGTCC GGCCTCACCG CGACGACAAG GTGCTGGTGG CCTGGAACGG TCTGGCCATC GCCGCCATGG CGCGTACCGC CCGCCTCATC GGCCACCCCG AATACCTTGA AGGCGCTACC CGGGCGGCGG ATTTCATCCT ATCGAACATG CGCAACGAAG AAGGTCGCCT GCTGCGGCGC TGGCGCAGAG GACAAGCCGG CATTCCCGCG TTCCTGGAAG ACTATGCCGC TCTTATCCTC GGGCTCATCG AACTTTACCA GGCTGGGTTC AATGCCCGTT ATCTGGCCGA AGCAGTGCAA CTTGGCCGCG ATATGCAAGA ACGGTTCGGC ACCCCCGACG GTGTCTATTA CGACACCGGC ACCGACGCCG AAGAGGTTCT GGTTCGCAAA AGGACTCTGC ACGACGGAGC GATGATCTCG GGCAATTCCA TGGCAGCCAT GGCCCTGTTG CGTTTGGGGT CTCTGACCGG CGAGCCTGCC CTCGAAGAGC ATGCCGAAAA AATCCTGCTG GCCTCTTCCA AACAATGGAC GGATGCGCCG ACAGCCAGCG GCCAGCTGCT CATGGCGCTG GATCTGGCTC TTTCCCAAAG GGAGGTACTG GTGATCGCGG CGCCCAAAGA CGACCCTGAA GGGACCAGGA TGGTAAAGGC TGCACATACC GGATTCCGCC CCAACCTGAT CATTCTATGG CATACGCCGG ATGACAATGC CCTGTCGGAG GTGACCCCCC TGGTGCGCGG CAAAACAATG CAGAATGGCA AAGCCACCGC CTACCTGTGC CGCGGCCAAA CCTGCATGGC ACCGGCCACA ACCGTAGACC AACTGCTTGA GCGACTGAAC AGTTGA
|
Protein sequence | MTNSQDRENL VSRLSEIDTS LLPPDGGDRY NRLIFESSPY LLQHATNPVD WHPWGQQAFD LAREQNKPVL VSIGYSTCHW CHVMEQESFE DREVAEVLNK LFIPIKVDRE ERPDIDNLYM TACQLVTGGG GWPLNVFLTP DKAPFYAATY MPRRPRGQMP GIIAILTKIG AMWQSDRDQL LQTGREIGET LIRLESSAAP VASSLTEAPL TEAFERFKAN FDHERGGFGK APKFPMPHNL SLLFHIAQRF GQETAEAMAI KTLQHIRLGG MYDHIGFGMH RYSVDAFWRV PHFEKMLYDQ ALVTLAALDA YQVTHDTFFE SLADQTMSYV LRDLSLPEGG FCSGEDADTE GAEGTFYLWT PQQVEEVLGH QQATIFCTCY EISEAGNFEG SNIPRLEMDL KEWAQWFGTD TDELGAVLED GRRKLLQARK LRVRPHRDDK VLVAWNGLAI AAMARTARLI GHPEYLEGAT RAADFILSNM RNEEGRLLRR WRRGQAGIPA FLEDYAALIL GLIELYQAGF NARYLAEAVQ LGRDMQERFG TPDGVYYDTG TDAEEVLVRK RTLHDGAMIS GNSMAAMALL RLGSLTGEPA LEEHAEKILL ASSKQWTDAP TASGQLLMAL DLALSQREVL VIAAPKDDPE GTRMVKAAHT GFRPNLIILW HTPDDNALSE VTPLVRGKTM QNGKATAYLC RGQTCMAPAT TVDQLLERLN S
|
| |