| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1709 |
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| Symbol | |
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| ID | 3724418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1995029 |
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| End bp | 1997719 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637751313 |
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| Product | hypothetical protein |
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| Protein accession | YP_357122 |
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| Protein GI | 77919307 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | [TIGR03623] probable DNA repair protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000066453 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAG ATCATGTAGC TTTGGATGCA TTGCTTGCAC GTCTCGAACA AGGGGCCATG
GTCCTTACGG TCAATAAACG CCTGGCCCGT TATCTGCGAC AGGCTTATGA CCGACAGCAA
CAAAATAAGG GCTGCAGCGC ATGGATTTCT CCGGCTGTAT ATGCCTGCGG CGGCTGGCAG
CGACAGATGG CTGAGCGTTT GGGCCTTGAC GGCAAAACTC TTGAGCCGCT GCAAGCGCTA
AGGCTCTGGG AACGGGCCAT CGAAGATGAT TTGAGCGCAA TGGGCGCCGG TCTTTTGCGG
GTTCCCGAAG CTGCCAGGGA AGCTGCCAGG GCACATCAGT TGTTGAGTGA GTACGGCGTT
GATTTTGATT CGGAGCAGGC CGGTGAGGAT CACCGGACGT TTTTGCGCTG GCGACGGCGC
TGGCGGGAGT TGTGCAGGGC GGGAGGCTGG AACGATCCGG CGCTTCTGCC TGGACGGGTT
TTAGAGGCGT TGCAAGGGGG GCAACTGCTG TTGCCGTCTG AAGTCTGGCT GGCCGGTTTT
GACGATTTGC CGCCGGTGAT CGAGGGATTA TGTCAGATCA TGCAGGAGCG TGGTACGGCT
GTTAGGCGGT GGCTCCCTCC TGCCTGCCAG GACCAGGTCG GTGGCCGCGT CGCTTATGCC
GACGTCGAAC AAGAGGTGCG TTGTTGTGCT CGCTGGGTGC GGCATTTGCT GGAAGGCAAG
GCTGAGCGCA TCGGTGTTGT GGTTTTGGAT ATGACCGCCT ATCAGAGCCG GTTGCAGAGG
ATTTTCCGGG AAGAACTCTC GCCGGGAGCG CTGCTACCCG GCGCAGACGC TGAAAAAGCT
TTCAATCTGT CTCTGGGAAC TCCGTTGCTG AATGAGGGGA TGGTTACCAC CGCGTTTGAG
CTTTTATCGC TGGGGCGAAC CGTTTCGCTG GACAGCCTCA GTTATTTACT GCGCTCGCCG
TTTGTGTGGG GACATCTTTC CGAGCAGCAT GCCAGGGCCG TTTTGGATCG GGAGTTGCGC
AATTTACGCA TGGGGCAGTT GCCGCTGAAA CAGGCAATGG TCCATGCCCG GCGGGGATTC
AAAAAAAAGC TGGGTTGTTG CGACCTTTTT TCCCGTCAGC TGGAAATGAT CGACAGCTTG
TTGAAAGATG CCCAACCGCG ATTGCCCGGC GCCTGGGCCC GGCATTTCGC CACACTTCTC
GAAACCTGCC AATGGTCTAA AGATCGCCCT TTCAACAGTC GTGAATATCA GGTTTTTACG
GCCTGGAAGG AGCTTCTGGC CGGCATGGCC TGCCTCGATG CGGTCAGTGC CCCGATGAAA
CGTGGCGAAG CATTGCGTTT ACTGCGGCGC CTGGCCGCCG ATGCCGTGTT CCAACCGGAA
GGATCGGAAG GACGTGTGCA GGTTCTGGGG GCATTGGAAG CGGCTGGCAT GCAGTTTGAT
GCCCTGTGGG TGCTGGGTGC CCATGAGGAC GTGTTCCCGG CCCCGGCACG TCCTCATCCC
TTTATTCCGG TCGCATTACA GAGACGTCTT GAAATGCCCC ATGCCGATGC CGCCCGCGAA
CTCGATTTTG CGCACAAAGT TGCTCAGCGT CTGCTGAATG CGGCACCGCA GCTGGTGGTC
AGTTGGCCCG AAGGTCTGGA CGGTCGCGAA CGTCAGCCAA GCCCCCTGAT TCACCAGCTG
CCGCCGATCG TGCCCGTATT GGCCGAAAGC CGGCAACCGG CAGCGTTGAT TCAGGCTGTC
GCGGGGAGAC TCGAACAGAT TGCGGACAGC AGCGGGCCAC CTATAGAGGC CGGCTCCAGG
ATTTCCGGCG GAACCGGGAT TCTCAAAGAT CAGGCGCTGT GTCCCTTTCG CGCTTTCGCC
CGACATCGAT TGGGTGCGCG GGCACTGGCT ACGGCCAGTC TCGGATTTGA CGGCCTGGAC
AGGGGATCCC TGGTGCATCG CGTTCTGGAA TGGTTCTGGA AGGATATCGG CAATTGGCAA
AGCTTGACGG CATTGGATTC AGCTGCCTTG CAACAGTTGC TGGTTAAGTA TATCGATCAG
GCTTTGGAGG AACTTGAAGC GGAACGTCGC GTGCCGTTTT CCAAAAGTCA GAAACATCTG
GAAAGTTCGC GCCTGCTGGC TTTGCTTGGA GAGTGGCTTG CTATCGAGGC GAAGCGCCCT
ACCTTTACCG TCGATACGCT TGAGGCCTGG CATCGGGAGA AATTCGGCCC TTTGACGTTG
CAGACGCGGA TCGACCGCAT CGACCGACTC GCCGACGGTT CCCAGGTCAT TATCGATTAT
AAAACCGGAC TGGCTTCTGT CCGTGACTGG CTTGGAGCGC GTCCCGTGGA GCCGCAATTG
CCGCTTTATA CCCTTGGTCG CACCGGCTCC GATCTCTCTG CCGTGGCCTT TGCCAAGGTT
CGCCGCGGCG ATAGCGGTTT TATCGGTATC GGAAGGGACG ATGACCTGAT TCCGGGGATT
GCCGCAACCG ACGGACATCG GCAGCTCGAA GCGGAAACGG ATATTGCAAC CTGGGAGGAT
CTGCTGCTTT TCTGGCGCCG GACCCTGCAG CAGCTCGGCA GGGATTTTTG CGACGGTCAG
GCCATTGTCG ATCCCATCAA TTCTCAAAAG GCCTGCGATC GCTGTGATTT GCAACCGCTG
TGTCGTATTT CCGAAAGGGA TGATTTTGCC GAGGACGAGG TTTTGCCATG A
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| Protein sequence | MQIDHVALDA LLARLEQGAM VLTVNKRLAR YLRQAYDRQQ QNKGCSAWIS PAVYACGGWQ
RQMAERLGLD GKTLEPLQAL RLWERAIEDD LSAMGAGLLR VPEAAREAAR AHQLLSEYGV
DFDSEQAGED HRTFLRWRRR WRELCRAGGW NDPALLPGRV LEALQGGQLL LPSEVWLAGF
DDLPPVIEGL CQIMQERGTA VRRWLPPACQ DQVGGRVAYA DVEQEVRCCA RWVRHLLEGK
AERIGVVVLD MTAYQSRLQR IFREELSPGA LLPGADAEKA FNLSLGTPLL NEGMVTTAFE
LLSLGRTVSL DSLSYLLRSP FVWGHLSEQH ARAVLDRELR NLRMGQLPLK QAMVHARRGF
KKKLGCCDLF SRQLEMIDSL LKDAQPRLPG AWARHFATLL ETCQWSKDRP FNSREYQVFT
AWKELLAGMA CLDAVSAPMK RGEALRLLRR LAADAVFQPE GSEGRVQVLG ALEAAGMQFD
ALWVLGAHED VFPAPARPHP FIPVALQRRL EMPHADAARE LDFAHKVAQR LLNAAPQLVV
SWPEGLDGRE RQPSPLIHQL PPIVPVLAES RQPAALIQAV AGRLEQIADS SGPPIEAGSR
ISGGTGILKD QALCPFRAFA RHRLGARALA TASLGFDGLD RGSLVHRVLE WFWKDIGNWQ
SLTALDSAAL QQLLVKYIDQ ALEELEAERR VPFSKSQKHL ESSRLLALLG EWLAIEAKRP
TFTVDTLEAW HREKFGPLTL QTRIDRIDRL ADGSQVIIDY KTGLASVRDW LGARPVEPQL
PLYTLGRTGS DLSAVAFAKV RRGDSGFIGI GRDDDLIPGI AATDGHRQLE AETDIATWED
LLLFWRRTLQ QLGRDFCDGQ AIVDPINSQK ACDRCDLQPL CRISERDDFA EDEVLP
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