Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1709 |
Symbol | |
ID | 3724418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1995029 |
End bp | 1997719 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637751313 |
Product | hypothetical protein |
Protein accession | YP_357122 |
Protein GI | 77919307 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3857] ATP-dependent nuclease, subunit B |
TIGRFAM ID | [TIGR03623] probable DNA repair protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000066453 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAATAG ATCATGTAGC TTTGGATGCA TTGCTTGCAC GTCTCGAACA AGGGGCCATG GTCCTTACGG TCAATAAACG CCTGGCCCGT TATCTGCGAC AGGCTTATGA CCGACAGCAA CAAAATAAGG GCTGCAGCGC ATGGATTTCT CCGGCTGTAT ATGCCTGCGG CGGCTGGCAG CGACAGATGG CTGAGCGTTT GGGCCTTGAC GGCAAAACTC TTGAGCCGCT GCAAGCGCTA AGGCTCTGGG AACGGGCCAT CGAAGATGAT TTGAGCGCAA TGGGCGCCGG TCTTTTGCGG GTTCCCGAAG CTGCCAGGGA AGCTGCCAGG GCACATCAGT TGTTGAGTGA GTACGGCGTT GATTTTGATT CGGAGCAGGC CGGTGAGGAT CACCGGACGT TTTTGCGCTG GCGACGGCGC TGGCGGGAGT TGTGCAGGGC GGGAGGCTGG AACGATCCGG CGCTTCTGCC TGGACGGGTT TTAGAGGCGT TGCAAGGGGG GCAACTGCTG TTGCCGTCTG AAGTCTGGCT GGCCGGTTTT GACGATTTGC CGCCGGTGAT CGAGGGATTA TGTCAGATCA TGCAGGAGCG TGGTACGGCT GTTAGGCGGT GGCTCCCTCC TGCCTGCCAG GACCAGGTCG GTGGCCGCGT CGCTTATGCC GACGTCGAAC AAGAGGTGCG TTGTTGTGCT CGCTGGGTGC GGCATTTGCT GGAAGGCAAG GCTGAGCGCA TCGGTGTTGT GGTTTTGGAT ATGACCGCCT ATCAGAGCCG GTTGCAGAGG ATTTTCCGGG AAGAACTCTC GCCGGGAGCG CTGCTACCCG GCGCAGACGC TGAAAAAGCT TTCAATCTGT CTCTGGGAAC TCCGTTGCTG AATGAGGGGA TGGTTACCAC CGCGTTTGAG CTTTTATCGC TGGGGCGAAC CGTTTCGCTG GACAGCCTCA GTTATTTACT GCGCTCGCCG TTTGTGTGGG GACATCTTTC CGAGCAGCAT GCCAGGGCCG TTTTGGATCG GGAGTTGCGC AATTTACGCA TGGGGCAGTT GCCGCTGAAA CAGGCAATGG TCCATGCCCG GCGGGGATTC AAAAAAAAGC TGGGTTGTTG CGACCTTTTT TCCCGTCAGC TGGAAATGAT CGACAGCTTG TTGAAAGATG CCCAACCGCG ATTGCCCGGC GCCTGGGCCC GGCATTTCGC CACACTTCTC GAAACCTGCC AATGGTCTAA AGATCGCCCT TTCAACAGTC GTGAATATCA GGTTTTTACG GCCTGGAAGG AGCTTCTGGC CGGCATGGCC TGCCTCGATG CGGTCAGTGC CCCGATGAAA CGTGGCGAAG CATTGCGTTT ACTGCGGCGC CTGGCCGCCG ATGCCGTGTT CCAACCGGAA GGATCGGAAG GACGTGTGCA GGTTCTGGGG GCATTGGAAG CGGCTGGCAT GCAGTTTGAT GCCCTGTGGG TGCTGGGTGC CCATGAGGAC GTGTTCCCGG CCCCGGCACG TCCTCATCCC TTTATTCCGG TCGCATTACA GAGACGTCTT GAAATGCCCC ATGCCGATGC CGCCCGCGAA CTCGATTTTG CGCACAAAGT TGCTCAGCGT CTGCTGAATG CGGCACCGCA GCTGGTGGTC AGTTGGCCCG AAGGTCTGGA CGGTCGCGAA CGTCAGCCAA GCCCCCTGAT TCACCAGCTG CCGCCGATCG TGCCCGTATT GGCCGAAAGC CGGCAACCGG CAGCGTTGAT TCAGGCTGTC GCGGGGAGAC TCGAACAGAT TGCGGACAGC AGCGGGCCAC CTATAGAGGC CGGCTCCAGG ATTTCCGGCG GAACCGGGAT TCTCAAAGAT CAGGCGCTGT GTCCCTTTCG CGCTTTCGCC CGACATCGAT TGGGTGCGCG GGCACTGGCT ACGGCCAGTC TCGGATTTGA CGGCCTGGAC AGGGGATCCC TGGTGCATCG CGTTCTGGAA TGGTTCTGGA AGGATATCGG CAATTGGCAA AGCTTGACGG CATTGGATTC AGCTGCCTTG CAACAGTTGC TGGTTAAGTA TATCGATCAG GCTTTGGAGG AACTTGAAGC GGAACGTCGC GTGCCGTTTT CCAAAAGTCA GAAACATCTG GAAAGTTCGC GCCTGCTGGC TTTGCTTGGA GAGTGGCTTG CTATCGAGGC GAAGCGCCCT ACCTTTACCG TCGATACGCT TGAGGCCTGG CATCGGGAGA AATTCGGCCC TTTGACGTTG CAGACGCGGA TCGACCGCAT CGACCGACTC GCCGACGGTT CCCAGGTCAT TATCGATTAT AAAACCGGAC TGGCTTCTGT CCGTGACTGG CTTGGAGCGC GTCCCGTGGA GCCGCAATTG CCGCTTTATA CCCTTGGTCG CACCGGCTCC GATCTCTCTG CCGTGGCCTT TGCCAAGGTT CGCCGCGGCG ATAGCGGTTT TATCGGTATC GGAAGGGACG ATGACCTGAT TCCGGGGATT GCCGCAACCG ACGGACATCG GCAGCTCGAA GCGGAAACGG ATATTGCAAC CTGGGAGGAT CTGCTGCTTT TCTGGCGCCG GACCCTGCAG CAGCTCGGCA GGGATTTTTG CGACGGTCAG GCCATTGTCG ATCCCATCAA TTCTCAAAAG GCCTGCGATC GCTGTGATTT GCAACCGCTG TGTCGTATTT CCGAAAGGGA TGATTTTGCC GAGGACGAGG TTTTGCCATG A
|
Protein sequence | MQIDHVALDA LLARLEQGAM VLTVNKRLAR YLRQAYDRQQ QNKGCSAWIS PAVYACGGWQ RQMAERLGLD GKTLEPLQAL RLWERAIEDD LSAMGAGLLR VPEAAREAAR AHQLLSEYGV DFDSEQAGED HRTFLRWRRR WRELCRAGGW NDPALLPGRV LEALQGGQLL LPSEVWLAGF DDLPPVIEGL CQIMQERGTA VRRWLPPACQ DQVGGRVAYA DVEQEVRCCA RWVRHLLEGK AERIGVVVLD MTAYQSRLQR IFREELSPGA LLPGADAEKA FNLSLGTPLL NEGMVTTAFE LLSLGRTVSL DSLSYLLRSP FVWGHLSEQH ARAVLDRELR NLRMGQLPLK QAMVHARRGF KKKLGCCDLF SRQLEMIDSL LKDAQPRLPG AWARHFATLL ETCQWSKDRP FNSREYQVFT AWKELLAGMA CLDAVSAPMK RGEALRLLRR LAADAVFQPE GSEGRVQVLG ALEAAGMQFD ALWVLGAHED VFPAPARPHP FIPVALQRRL EMPHADAARE LDFAHKVAQR LLNAAPQLVV SWPEGLDGRE RQPSPLIHQL PPIVPVLAES RQPAALIQAV AGRLEQIADS SGPPIEAGSR ISGGTGILKD QALCPFRAFA RHRLGARALA TASLGFDGLD RGSLVHRVLE WFWKDIGNWQ SLTALDSAAL QQLLVKYIDQ ALEELEAERR VPFSKSQKHL ESSRLLALLG EWLAIEAKRP TFTVDTLEAW HREKFGPLTL QTRIDRIDRL ADGSQVIIDY KTGLASVRDW LGARPVEPQL PLYTLGRTGS DLSAVAFAKV RRGDSGFIGI GRDDDLIPGI AATDGHRQLE AETDIATWED LLLFWRRTLQ QLGRDFCDGQ AIVDPINSQK ACDRCDLQPL CRISERDDFA EDEVLP
|
| |