| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1708 |
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| Symbol | |
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| ID | 3724417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1991676 |
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| End bp | 1995032 |
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| Gene Length | 3357 bp |
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| Protein Length | 1118 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637751312 |
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| Product | ATP-dependent exoDNAse (exonuclease V) beta subunit |
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| Protein accession | YP_357121 |
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| Protein GI | 77919306 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC GTATGACACA GCCCCCCGAT CACGATGCGC GCAGACAGGC GCTCGATCCT
GCCCGGTCCT TTATCGTGCA AGCTCCTGCA GGCAGTGGTA AAACCGAATT GCTCATCCAA
CGCATTCTGG CTTTGCTGGG TGGCGTGCAA CAGCCTGAAG AGGTGCTGGC CATTACCTTT
ACACGCAAAG CCGCCGGCGA AATGCGCGAT CGCCTGGTTC GGGCGCTTGA AGCGGCCCGT
CAACCGGAAC CACAGGCGGA GCATGCCCGT ACGACCTGGC GCCTGGCCAG GGCGGTGTTG
GAAAACGATG CGCGCCATGA TTGGCGCCTG CTTGAGAATC CCGTGCGCCT GGCGGTGCAG
ACCATCGACA GCTTTTGCGC ATCTCTGGTG CGGCGCATGC CCTGGTTATC CCGCTTCGGT
GCCCAGGCCG CGATTGTTGA GGATGCCAGG GAGCTCTACC GACAGGCCGC TGAAAGGGTG
CTGAAGCTTG CCGAGGGCCC TGACAACTAT GGGGAAGCGG CCTGCTTGCT TCTGAGTCAC
CTCGACAACC GCATGGAGCG GCTATGCGAA CTGCTGGTCG GTATGCTGGC CCGGCGCGAT
CAATGGTTAC GGCATATCTA CGGGCAGCAG CCCGAACAGC GGCGGCAGAT TTTTGAAGGG
GGCTTGCGCT GTCTGGTAGA AGGCGTGCTG GATCGACTGT ATGGCCTGCT GGATCCTGAG
CAGAAGGATG CCATGGTGCA TCTGGGATGT TTTGCCGGTT CCAACGTACA GGCCCTGGGG
ATCGAAAACG GCATCCATGT TCTGTCCGGT CTGGACGGTT TTCCAGCGGC ATCGGCCGAT
GCCCTGCCGA TCTGGCGCGG TCTTGCTGAA TTAGTGCTGA CTCGCAGCGG TACGGTGCGC
AAGCGGCTGG ATAAAAATTG CGGTTTTCCT CCCGGCAAAC AGGAACCGGC GGCCTCCATG
AAAAAGGAGA TGGCGCGCTT ATTGGAAACG CTTGCCGCCG ATGAAGGCGT ACTGGAGCTT
TTTGCCGAGG TCCGCTCGCT GCCGCCCGTG GTTTATGAGC CGGACCAATG GCAGGTTCTC
GAGGCCCTGA CCACCCTGCT GCCGAGGGCC GTCGCCGAGT TGTGGCTGGT ATTCAAGGAA
CAGGGGCAGT GCGACTTTGT CGAGGTGGCG CTGGCCGCCG GCAGGGCCCT TGGCGAGGTT
GATGCTCCCA CCGATCTGCT GCTGCATCTC GATAGCCGAA TTCGCCATAT CCTGGTGGAC
GAGTTTCAGG ATACCTCCTG GGGACAGTTC CTGTTGCTGA AAAAACTGAC CGCCGGATGG
CAACAGGGTG ACGGGCGCAG TCTGTTTCTG GTCGGGGATC CCATGCAGTC CATTTATCGT
TTTCGGGAGG CCGAAGTCGG ACTTTATCTG CAGGCACGGC ATCACGGCAT CCATCAGTTG
CGACTCGAAG CTCTGTACCT GAGTACGAAT TTCCGGTCCC AGGCGGGGGT CGTCGATTGG
GTCAACCGGG TTTTCCCGGA GTTGTTCCCC CCTCGTGAGG ATGAAGCACT GGGCAGCGTG
ACCTATGCTG CTTCGGTGGC GGCGCGGGAT GTTCTGGATG GGCCGGCCGT GACCTGTCAT
CCTATGGCGG GGCGGGATGA CCGCGCCGAG GCCTTGCAGG TTGTGGACCT GGTGCGCCAG
GCGCGCCGCG CCGATCCGGA GGGAACCGTT GCGGTGCTGG TGCGTGCGCG CACCCATCTC
AGCCAGATTC TCACAGCGTT TCGGGAAGCC GGGTTGCCGT TTCGCGCCCA GGAAATCGAT
GCTTTGGCCG ATCGGTCGGT CGCGCAGGAT TTACTTGCTC TGACGCGTGC GTTACTCCAT
CCTGGCGATC GGGTGGCCTG GCTGGCTGTT CTGCGCGCGC CATGGTGCGG ATTAAGTCTG
GCCGATCTGC ACGCTTTGTG CGGCGAAACT CCGGATGCCA CCTTGCCCGA ATTGCTGCGT
CAGCCGCAGC GGCTTATGCG GATGTCGGCC GATGGCCGCA TGCGGGTTGA ACGCTGCCTG
GGGGTACTGA ATCAGTCTCT GTCCCAGCGC GGCAGGGTAT CCTTGCGGAT GCTGGTTGAA
GGGGCCTGGC TGGCTCTTGG CGGGCCTGGG TGTCTGGATG ATGCCGGTCT GGTCGATGCC
GAAGCGTTGT TCGGTCTGCT GGATCAGCTT GATTACGGCG GGGATATGCT GCCTATGGAG
GGTCTGGCCG ATAAGCTATC CAAGCTGTTT GCCGCTCCCG ATCCCGCTGC TGACGATACT
CTCCAGGTCA TGACTATCCA TAAGGCCAAA GGCCTTGAGT TCGACACCGT TATCCTGCCG
GGTCTGGGCC GCCGACCTCG CACCGAAGAC GCCCCTCTGA TGCGCTGGCT CGAACTGCCG
GAGACGGGGT TGTTGTTGGC GCCCCTGGCT CCATTGGATG GCCAGAGCCG CGATCCTATT
TACGATGCGA TCGGGCGTGT TGAAAAACAG AAATGCGACC TGGAAATCGC CCGGGTCCTC
TATGTGGCGG CAACCCGCGC CAAAAAGCGG TTGCATTTGC TGGGCTATGC CAGGCCCTCC
AGGGACGGGG AGTTTCGTCC GTCTGGCGGT TCTTTTCTGG AAAAACTCTG GCCGGCCGTA
GGCGACCGTT TCGATGGTTT GAATCCTGAG CTCACGGATT CGTCCGATGC CCCGAAAACC
GTCAGGCAGA TGCGGCTGCT CGGTTCCGAC TGGGTTTTAC CCGCACTGCC TTCGACATCC
GCACAAAGTT CCATGGAGGT GCTGAGCCCT TCTTCGACAG CCCATCACTC TCAGGGGACG
ACGCTCATGC CGGAAACGGA AGATGGTCGC CATATCGGCA CTCTGGTGCA TGCCTGTCTG
GAGCGTATCG CCAATGAAGG CCTTGAGCAT TGGTCGATTG GTCGTGTTGA AAAGGAACGG
CCGACGCTGT GTCATCGTCT TGGCCGTATG GGAGTGGCGG TTGATCGCTG TATGCAGGCG
GCGGATCGCA TCGTTGAGGC GGTGTCCAAT ACCTTGAACA GTGATCGAGG GCGGTGGATT
CTCGGAAAAC ATGAAAAATC CGCCTGCGAG CTTTCTCTGT CCGGGGTGCT GGACGGCCGT
ATTATCCATG CCGAAATCGA TCGCACGTTT GTTGATAAAG AGGGGGTGCG CTGGGTTGTC
GACTATAAAA CCGGCGACAG CAAGGGCATG GCGGATGACG TGTTTTTTGA ACAGCAAGCT
CATATTTATA AAGGCCAGTT GGAACTTTAT GCCCGCCTGT TTCAGGCCTT GGAGCCAGGA
TGCCATGTTC GCACGGCCTT GTATTTTCCC ATTCTGGACG GTTGGTTTAC TCTGTGA
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| Protein sequence | MKLRMTQPPD HDARRQALDP ARSFIVQAPA GSGKTELLIQ RILALLGGVQ QPEEVLAITF
TRKAAGEMRD RLVRALEAAR QPEPQAEHAR TTWRLARAVL ENDARHDWRL LENPVRLAVQ
TIDSFCASLV RRMPWLSRFG AQAAIVEDAR ELYRQAAERV LKLAEGPDNY GEAACLLLSH
LDNRMERLCE LLVGMLARRD QWLRHIYGQQ PEQRRQIFEG GLRCLVEGVL DRLYGLLDPE
QKDAMVHLGC FAGSNVQALG IENGIHVLSG LDGFPAASAD ALPIWRGLAE LVLTRSGTVR
KRLDKNCGFP PGKQEPAASM KKEMARLLET LAADEGVLEL FAEVRSLPPV VYEPDQWQVL
EALTTLLPRA VAELWLVFKE QGQCDFVEVA LAAGRALGEV DAPTDLLLHL DSRIRHILVD
EFQDTSWGQF LLLKKLTAGW QQGDGRSLFL VGDPMQSIYR FREAEVGLYL QARHHGIHQL
RLEALYLSTN FRSQAGVVDW VNRVFPELFP PREDEALGSV TYAASVAARD VLDGPAVTCH
PMAGRDDRAE ALQVVDLVRQ ARRADPEGTV AVLVRARTHL SQILTAFREA GLPFRAQEID
ALADRSVAQD LLALTRALLH PGDRVAWLAV LRAPWCGLSL ADLHALCGET PDATLPELLR
QPQRLMRMSA DGRMRVERCL GVLNQSLSQR GRVSLRMLVE GAWLALGGPG CLDDAGLVDA
EALFGLLDQL DYGGDMLPME GLADKLSKLF AAPDPAADDT LQVMTIHKAK GLEFDTVILP
GLGRRPRTED APLMRWLELP ETGLLLAPLA PLDGQSRDPI YDAIGRVEKQ KCDLEIARVL
YVAATRAKKR LHLLGYARPS RDGEFRPSGG SFLEKLWPAV GDRFDGLNPE LTDSSDAPKT
VRQMRLLGSD WVLPALPSTS AQSSMEVLSP SSTAHHSQGT TLMPETEDGR HIGTLVHACL
ERIANEGLEH WSIGRVEKER PTLCHRLGRM GVAVDRCMQA ADRIVEAVSN TLNSDRGRWI
LGKHEKSACE LSLSGVLDGR IIHAEIDRTF VDKEGVRWVV DYKTGDSKGM ADDVFFEQQA
HIYKGQLELY ARLFQALEPG CHVRTALYFP ILDGWFTL
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