Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1670 |
Symbol | xseA |
ID | 3724373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1950002 |
End bp | 1951207 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637751268 |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_357084 |
Protein GI | 77919269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000014352 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATTT CTGAAGGAAC CGTATCCGTA TCACGCCTCG TCTATCTGTT GAAAGAGGTT GTCGAAGATA ACTTCGTCCA GGTACTGGTT ACGGGAGAAA TCGCCAATTT CTCGGCACCG TCTTCGGGGC ATTACTACTT TGCCGTAAAA GACGATCAGG CCCAGTTGCG CGGCGTCATG TTTCGATCCA GCAACCGATT GCTGAAATTC ACCCCCGAAA ACGGTATGCA GGTGTTGTGC GGCGGGCGTG TCTCCCTCTA TCCCCAGCGC GGTGAACTGC AGTTGGTGGT CGATCGGATG GAGCCTTTGG GCGTAGGCAG TTGGCAACTG GCTTTTGAAA AACTTAAAAC CAAGCTGGAT GCCGAAGGTT TATTCGAGGT GGGGCGTAAA CGTCGTCTGC CGTCTTTCCC GCGCACCATC GGTGTCGTGA CCTCGCCGAC GGGGGCTGCC ATTCATGATA TTCTCAACGT TTTGCGTCGC CGGGGTGCCG GTCTGCACGT GTTGCTGTCT CCGGTCCGCG TGCAGGGGGA TGGGGCGGCT GACGAGATCG CCCGGGCAAT TGCCGATTTT AACCGCCATG GGCAGGCCGA TGTCCTGATT GTCGGTCGCG GAGGAGGCTC GCCGGAGGAC TTGTGGGCCT TTAACGAAGA GGTCGTGGCC CGTGCCGTGT TTGCCTCCCG GATTCCTGTT ATCTCGGCTG TAGGTCATGA GGTCGATGTG ACCATTTCGG ATCTTGTCGC CGATCTGCGG GCACCGACTC CCAGTGCTGC TGCCGAACTT GTCGTGCAGG GACGTCAGGA ACTGGAAAGG CATGTCGACC ACCTGGTCAT GCGTCTCAGC GGACAAATGC AGGGACGCCT GTCGTTACTC AAGGAGCGGC TTGACGGTTT GCGCCGCCGT TTGCGGTCAC CGGTCGACGA TTTGCGCCGC CAGTATCGCG ATCTCGAGCA GTTGCGCAAA CGGTTGTTTT CGGCTATGGA AAAGACGATG CAGCGTGCTG CCAACCGTCT TGGGCTGGCC GGCAGTCGTC TGCATGCGTT GTCGCCTCTG GCCACCCTCG ATCGCGGATA CGCCATTGTG TTTTCCGCAA AGACCTCGAC GATAGTTCGT GATGCCCGCA CATTGACACC GGGCGATCGG GTTCAAATAC GTTTTGCAAA GGGATCCGTA GAGGCTACTG TTGACGAGGT GGATCATGGA GATTAA
|
Protein sequence | MNISEGTVSV SRLVYLLKEV VEDNFVQVLV TGEIANFSAP SSGHYYFAVK DDQAQLRGVM FRSSNRLLKF TPENGMQVLC GGRVSLYPQR GELQLVVDRM EPLGVGSWQL AFEKLKTKLD AEGLFEVGRK RRLPSFPRTI GVVTSPTGAA IHDILNVLRR RGAGLHVLLS PVRVQGDGAA DEIARAIADF NRHGQADVLI VGRGGGSPED LWAFNEEVVA RAVFASRIPV ISAVGHEVDV TISDLVADLR APTPSAAAEL VVQGRQELER HVDHLVMRLS GQMQGRLSLL KERLDGLRRR LRSPVDDLRR QYRDLEQLRK RLFSAMEKTM QRAANRLGLA GSRLHALSPL ATLDRGYAIV FSAKTSTIVR DARTLTPGDR VQIRFAKGSV EATVDEVDHG D
|
| |