| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1580 |
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| Symbol | |
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| ID | 3724280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1848437 |
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| End bp | 1849831 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751175 |
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| Product | transcriptional regulator |
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| Protein accession | YP_356994 |
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| Protein GI | 77919179 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGTG AAAAGAAGCC TGGATACAAA ATTCATACGA TGACCGAAGC TATTCTGGAG
AGCATATCGG ACGGGGTGTT CACCGTGGAT ATGGATTGGC GCGTTACCTC GTTTAATCGA
GCCGCCGAAG AGATCACAGG CGTTTCGCGG CAAGAGGCAA TCGGTCGCCG CTGTTCGGAA
GTATTTCGTT CCAGTTTGTG CGGGACCGCC TGTGCACTCA GGCAAACCAT GGAAGCCGAT
GAACCCATTA TCGGTAAATC CGGGTACATC ATCAACGCGG ATGGCGACCG TATTCCCATC
AGTATTTCCA CGGCTGTTTT GCGTGATGCC GCCGGTAATG TCATAGGTGG CGCGGAAACC
TTTCGCGATC TTTCTGAAAT CGAGGCACTG CGTCAGGAAC TCGGAGGTAA ATTCCGGGTT
GGCGATTTGA CCAGCCGAAG TCCTCTCATG CAGCGTGTTT TCGAGGTTTT GCCCGCTATT
GCCGCCAGTC CCAGTACGGT GCTGATCCTT GGAGAGACCG GCACCGGCAA GGAGTTGATG
GCACGGACAA TTCATTCTCT CAGCCCTCGC CACAAGGGAC CCTTTATCGC GGTCAATTGC
GGTGCGCTGC CCGATACGCT TCTGGAGTCG GAGTTGTTTG GCTACAAAGC CGGAGCTTTC
ACTGGCGCCA ACAAGGATAA ACCGGGCCGT TTTGCTTTGG CCAGGGGAGG GACCCTGTTT
CTCGATGAAA TCGGAGAGAT AAGCCCCGCC CTCCAGATCA GGTTGTTGCG CGTGCTACAG
GAACGCACAT ACGAGCCTCT CGGAGGGATC CGCTCCGAAA ACGCCGATGT CAGGATTATC
GTAGCGACTA ACAAAGATCT TTCCAGCCAG GTTCGGCAAG GAATTTTCCG TGAAGATCTC
TATTACCGGG TAAATGTGGT GCGTATCGAA CTGCCCCCGC TGCACCGGCG AAAAGAAGAT
ATCCCCTTTC TCGTAGAGCA GTTTATCGTC CAGTTCAATC GATTGCAGCA AAGATCCGTG
AAGGGAATCA CCGCGGAGGC ATTGTCTCTG CTTATGGCCC ACGATTGGCC AGGCAACATT
CGTGAACTGG AAAATATTGT CGAACGGGCT TTCATCCTTT GCAGCGACGG GGATATCGGC
ATTGAACATC TGCCCAAGGA GTTGACAGGG CATGGGGCTG CATCGGATGC GCATACCGAT
ACCGATATTA GATCCGCCCA TGATATTCTC GACGTCCAGG CTATTCGATC CGCACTCGAA
CGAAATTCTT TCAACCGACT GGCAGCAGCG AAGGAACTCG GCATCCACAA GACCACGCTT
TTCCGTAAAA TGAAGAAGCT GGGTATCCCA CTTCCCGCGC AGGATGGCCG CGCCAACCGG
AAGAAACCAC AGTAG
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| Protein sequence | MNSEKKPGYK IHTMTEAILE SISDGVFTVD MDWRVTSFNR AAEEITGVSR QEAIGRRCSE
VFRSSLCGTA CALRQTMEAD EPIIGKSGYI INADGDRIPI SISTAVLRDA AGNVIGGAET
FRDLSEIEAL RQELGGKFRV GDLTSRSPLM QRVFEVLPAI AASPSTVLIL GETGTGKELM
ARTIHSLSPR HKGPFIAVNC GALPDTLLES ELFGYKAGAF TGANKDKPGR FALARGGTLF
LDEIGEISPA LQIRLLRVLQ ERTYEPLGGI RSENADVRII VATNKDLSSQ VRQGIFREDL
YYRVNVVRIE LPPLHRRKED IPFLVEQFIV QFNRLQQRSV KGITAEALSL LMAHDWPGNI
RELENIVERA FILCSDGDIG IEHLPKELTG HGAASDAHTD TDIRSAHDIL DVQAIRSALE
RNSFNRLAAA KELGIHKTTL FRKMKKLGIP LPAQDGRANR KKPQ
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