| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1562 |
|---|
| Symbol | |
|---|
| ID | 3724261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1827868 |
|---|
| End bp | 1829127 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637751157 |
|---|
| Product | Zn-dependent peptidase |
|---|
| Protein accession | YP_356977 |
|---|
| Protein GI | 77919162 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000000000390885 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAAA AATCTGTCCT GGATAATGGC ATCCGTATTA TTACCGAACG CGTACCCGGA
GCTTATTCGG CTACGGTAGG TTTTTGGGTC GAATGCGGGT CGCGCCACGA ATCGTCTGAA
CAAAGCGGCG TGTCTCATTT TCTGGAACAC ATGCTGTTCA AAGGGACAGT TACCCGTAGC
GCCCCGTCCA TCGCCAAAGA AATAGATGCG GTGGGCGGGG CCCTCAATGC TTTTACCAGT
TGCGAATATA GCTGTTACTA CGCAAAGGTC GCAGGGCGCC ACCTGTCCAT GGCGGTGGAT
CTGCTTGCGG ATATCATTCT TAATTCGGTA TTCGATTTCG ACGAACTGGA GAAAGAGCGG
CGGGTTATTC TCCAGGAAAT CCACATGCTC GAAGATTCGC CCGAGGAGTG CATTCATGAA
ATGTTTACGC ACTCTTTCTG GCAGGAGCAT CCCCTGGGCC GGCCTATCGC CGGATCGGTC
CAATCGGTAC AATCACTTGA ACGCAGAGAC CTCCTCGCGT ATCTCGAAAA ATTTTATTGT
GGCAGCAATC TGATCATTTG CGTGGCCGGC GATGTTCAGC ATGAAGATCT GGTTGAACAG
ATCTCCCGTC TTGCCGGCGA CCTCCCTGTC GGTTGCAAAA GCGCCGCAGG TTCCCCACCT
CTCACGCATT CAACGATTCA GGTAGCGCAT AAAGACATTG AACAAGTTCA TTTCTGTCTG
GGGACCAGAG CGCCCGATCA ACGTCACGGT CAGCGTTTCA CCGGTAATAT ACTGAATACC
ATGCTCGGGG GCAGCATGAG CTCCCGACTG TTTCAGACCC TGCGCGAAGA ACGCGGCATG
GCATATTCCG TTTACAGTTA TCTGACATCC CATTCGGATT CGGGTGCCTT GGTGGTCTAT
GCCGGAACCT CTGCTTCCGA AGTCCAACAT GCCATCAATA TCGTGCTCAG GGAGTTGTCG
CGTTTTCAGC ACCATGAGGT GAATCCCGAG GAATTACAGG CGGCGAAGGA ACTGATCAAA
GGTCAGTTCA TGCTTTCGCT GGAGAGTACC GAAAATCGTA TGACACGGCT CGCCAAGAAT
GAAATCTATC TGGGGCACGT TCAGACTCCC GACGAGATTG TCGAACATGT GCAGCAGGTT
ACGGGTGAGG ACATTCTGCA GTTAACGGGA AAATATCTGC GGGATGAACA TCTGAACCTT
CAAATGGTCG GCCCCATTAC GGGAGAAGGT TTTCCTTCGG TCGATCTGAC TCTTGGCTGA
|
|---|
| Protein sequence | MVQKSVLDNG IRIITERVPG AYSATVGFWV ECGSRHESSE QSGVSHFLEH MLFKGTVTRS
APSIAKEIDA VGGALNAFTS CEYSCYYAKV AGRHLSMAVD LLADIILNSV FDFDELEKER
RVILQEIHML EDSPEECIHE MFTHSFWQEH PLGRPIAGSV QSVQSLERRD LLAYLEKFYC
GSNLIICVAG DVQHEDLVEQ ISRLAGDLPV GCKSAAGSPP LTHSTIQVAH KDIEQVHFCL
GTRAPDQRHG QRFTGNILNT MLGGSMSSRL FQTLREERGM AYSVYSYLTS HSDSGALVVY
AGTSASEVQH AINIVLRELS RFQHHEVNPE ELQAAKELIK GQFMLSLEST ENRMTRLAKN
EIYLGHVQTP DEIVEHVQQV TGEDILQLTG KYLRDEHLNL QMVGPITGEG FPSVDLTLG
|
|---|
| |