Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1553 |
Symbol | nusA |
ID | 3724252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1817979 |
End bp | 1819199 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637751148 |
Product | transcription elongation factor NusA |
Protein accession | YP_356968 |
Protein GI | 77919153 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 8.02973e-18 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGTAA ATCTTAACCA TATCATCGAA CAGGTTGTGA AAGAAAAGGG CATTGATCGG GGAGTTCTGG TCGAAGCCCT TGAGTCTGCC GTGCTTTCTG CAGCGAACAA AAAGTACCGC AATACTCGCG ATCTGGAAGC TCACTTCAAC GACGGACTGG GGGAGGTTGA ACTCTTTGAG TTCGTAACGG TTGTCGATGA GGTGGTTGAC TCCTATAAGG AGATCGATCT CGAGGAAGCC CGTGAAATCG ATGAAGAAGT CGAGGTGGGC GACTCCCTGG GGATGAAGAT AGAAAGCGGC AACTTCAGCC GCATCGCGGC CCAAACCGCC AAGCAAGTCA TTATTCAGAA GGTGCGCGAA GCCGAGCGGG AAAAAATATA CAATGAGTTC AAGGATCGTG TCGGCGAACT TGTTAACGGC ATCGTCCGCA GGTACGAGCG CGGTGATCTT ATCGTCGATC TCGGCCTTGC CGAAGGGCTG TTGCCTCACC GGGAACAGGT GCCCAGGGAA AACTATCGTC AGGGGGATCG GGCACGCGTG CTTATCTCCG AGGTTAAAAT CTCTACCAAG GGGCCGCAGA TTATTCTGTC GCGAACCCAT CCCGGGCTTG TGGCATCGCT TTTCCAGTTT GAGGTGCCCG AGATTGCCGA AGGTATCGTG GAGATCAAGG CCGTGGCCCG TGAGGCCGGT AGCCGCACCA AGATTGCAGT AGCCTCTTAC GATCCGGATG TTGACCCTGT CGGCGCCTGT GTCGGCATGC GGGGTTCTCG TGTGCAGAAC GTGGTTTCCG AATTGCGGGG TGAAAAGATC GATATCGTTC CCTGGTCGCC TGACGTGGGA CGCTTTGTAT GTGCCTCTCT CGCGCCGGCT GAGGTCACCA GAATCTATCT CGACAACGAT GAACAGGCCC TGGAAGTCAT TGTGCCTGAC GATCAGTTGT CTCTGGCCAT TGGTAAAAAG GGTCAGAATG TCCGCTTGGC GGCTAGGTTG ACCGGCTGGA ATATCGATAT CAAGAGCGAG ACACGTGCCG CAGAGGCCGC CAAGGAGGCC CTTGGGGAGT CCGTGGCTGT TGAAGATGCC TCGTCTGAGG ATGTGGCATC CGAGGACGCC ACCGTACAGG AATCACCGAG TGTAGATGCG GTGTTGGATG ATGCTTCGGA CGAAGTGACG GAGGTTTCAG ATTCGAATGA AGAAGGATCG GTCGAAGAGC CGTCGGCCTG A
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Protein sequence | MLVNLNHIIE QVVKEKGIDR GVLVEALESA VLSAANKKYR NTRDLEAHFN DGLGEVELFE FVTVVDEVVD SYKEIDLEEA REIDEEVEVG DSLGMKIESG NFSRIAAQTA KQVIIQKVRE AEREKIYNEF KDRVGELVNG IVRRYERGDL IVDLGLAEGL LPHREQVPRE NYRQGDRARV LISEVKISTK GPQIILSRTH PGLVASLFQF EVPEIAEGIV EIKAVAREAG SRTKIAVASY DPDVDPVGAC VGMRGSRVQN VVSELRGEKI DIVPWSPDVG RFVCASLAPA EVTRIYLDND EQALEVIVPD DQLSLAIGKK GQNVRLAARL TGWNIDIKSE TRAAEAAKEA LGESVAVEDA SSEDVASEDA TVQESPSVDA VLDDASDEVT EVSDSNEEGS VEEPSA
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