Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1529 |
Symbol | |
ID | 3724228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1792914 |
End bp | 1793594 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637751125 |
Product | putative YVfC-like sugar transferase |
Protein accession | YP_356945 |
Protein GI | 77919130 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGC AGCCTGATAT GTTCTTGAAG CGTTGTCTCG ATCTGTTTTT TGCGGCGACC CTGTTACTGC TGTTGTTGCC GCTGTTGTCG GGGGTGTGGT TGCTGGTGCG CTGGAAATTG GGTAAACCCG TTTTTTTTCG ACAGGTACGA CCGGGGCTGA ATGAGCGTCC CTTCACTTTG TACAAATTCC GCACCATGAG CATGGATCGG GACAATGACG GCAATCTGCT GCCCGACGGG GCGCGCCTGA CTTCCCTGGG GCGCATTCTG CGCAATACCA GTCTGGATGA ATTGCCCGAG TTGTTCAATG TTCTAAAGGG GGATATGAGC CTGGTCGGAC CTCGGCCTTT GTATAGCAAG TATCTGCCCT GGTACAGTCA GCGCGAACGC CTGAGACATA CGATAAAACC GGGAATTACC GGCTGGGCCC AGATTAACGG ACGTAACAGG TTGCCATGGG ATCAGCGGCT GGCAATGGAT GTCTGGTATG TCGAAAACCG GTCCTTGCTT CTGGATGGTA AGATTTTATT GAAGACCGTC TCGTTTGTCC TGAACCGCCA TGGAGTATCT GCCGATCCGG ATCTGGTGGA AAACGATCTG GATATCGAAC GGTGCGAGCT TTCAACGGAC GGAACATATC GTGGAAATAT GATTCCCAGA GGAAATCATG ACGAAGCGTA A
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Protein sequence | MELQPDMFLK RCLDLFFAAT LLLLLLPLLS GVWLLVRWKL GKPVFFRQVR PGLNERPFTL YKFRTMSMDR DNDGNLLPDG ARLTSLGRIL RNTSLDELPE LFNVLKGDMS LVGPRPLYSK YLPWYSQRER LRHTIKPGIT GWAQINGRNR LPWDQRLAMD VWYVENRSLL LDGKILLKTV SFVLNRHGVS ADPDLVENDL DIERCELSTD GTYRGNMIPR GNHDEA
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