Gene Pcar_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1527 
Symbol 
ID3724226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1790331 
End bp1791446 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content54% 
IMG OID637751123 
Productglycosyltransferase 
Protein accessionYP_356943 
Protein GI77919128 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCATG TCGTTGTTAT TGGCAGCACG GCTTTTTCCC TGCTCAACTT TCGTGGGGCA 
TTGCTCGAGG GGCTGGTGCG CAGGGGACAT AAAGTCGGAG CGGTTGCGCC GTCCGCTTCC
GAAGAAATCA AGTCCCGTCT TGAGCGTATG GGGGTTTCCT ATTTCGATGT CCCTCTGCGG
CGAAGGGGTT TGACCCCTGT TGGCGACATG ATCTATCTTT GGCGGCTTTT TCGTTTGTTT
CGATCCATTA AGCCGGATCT TGTTTTGAGT TACACGATCA AGCCGGTTAT TTTCGTATCT
CTGGCCGCCC GGCTTGCAGG TATTCCTTAT ATTTCCTCCA TGATAACAGG TCTTGGTTAT
ACCTTTTCCA GCCATACGCA TTTGGCCAGG GCATTGGGTG TCCTTGCTGT TTGCCTGTAC
AGGATCTCCC TGCGTCATAA TCGTGTCGTG TTTTTTCAGA ACCACGATGA TCTAAACGTT
TTCACCGATC TGCATCTTTT GCCCGGGTAT GTCCGATCCG TTGTCATACC CGGCTCCGGG
GTCGACGTGG AGCATTTCAC ACCGGCGCCT TACCCCGATC GGGATGCTTT TTTAATGATC
GCACGTCTGG TCAGGGAAAA AGGTGTATTC GAATACCTGG AGGCGGCAAA AGTGTTGAAT
GCCGATTACC CCAAGGTCCG CTTTCGCCTG GCGGGTTTCC CCGGAAAGGG AACCTCGTAT
CTTTCGGAGA CGGACTTTGC CGAAGTTAAC GGCGCGGGGG CGGTTGAGTA TCTCGGCAGG
CTGAAAGATG TCCGATCTGC GATAGCGGAT TGTTCGGTTT ATGTCCTGCC CACTCATGGC
GGCGAAGGTA TTCCCCGCAC GGTACTGGAG GCCATGGCTA TGGGGCGAGC CGTGATCACC
ACGGATACCG CCGGCTGCAG GGAGGCTGTT GTCGACGGCA AGTCCGGTTT GCTGGTGGCT
CCGCGCAATG TGCCGGCGTT GGTGGCGGCG ATGAAACGTC TGCTTGACGG CCAACGGGAA
AAGGCAAAAA TGGGCGATGC CGGCAGAAAG AGGGCGGTTC AGATATACGA TGTGCGCAAG
GTCAACAACA TGATTTTCGA AAATTTGGAG CTTTGA
 
Protein sequence
MAHVVVIGST AFSLLNFRGA LLEGLVRRGH KVGAVAPSAS EEIKSRLERM GVSYFDVPLR 
RRGLTPVGDM IYLWRLFRLF RSIKPDLVLS YTIKPVIFVS LAARLAGIPY ISSMITGLGY
TFSSHTHLAR ALGVLAVCLY RISLRHNRVV FFQNHDDLNV FTDLHLLPGY VRSVVIPGSG
VDVEHFTPAP YPDRDAFLMI ARLVREKGVF EYLEAAKVLN ADYPKVRFRL AGFPGKGTSY
LSETDFAEVN GAGAVEYLGR LKDVRSAIAD CSVYVLPTHG GEGIPRTVLE AMAMGRAVIT
TDTAGCREAV VDGKSGLLVA PRNVPALVAA MKRLLDGQRE KAKMGDAGRK RAVQIYDVRK
VNNMIFENLE L