| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1424 |
|---|
| Symbol | |
|---|
| ID | 3723851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1673330 |
|---|
| End bp | 1673611 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637751016 |
|---|
| Product | integration host factor, alpha subunit |
|---|
| Protein accession | YP_356840 |
|---|
| Protein GI | 77919025 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.000000184784 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGG CTGATCTGGT GGAAAAAGTT TATCTGAAGA CCGGGTTTTC TAAAAAGGAA
TCTTCAGATA TCGTTGAGAT GGTATTTGAT CTTATGAAGA ACACCCTCGA AAAGGGTGAA
AAGATCAAAC TTGCCGGATT CGGTAATTTT GTCGTCAAGC AAAAAGCTAC CCGCCGCGGG
CGTAATCCAC AGACTGGCGA AGAAATAGAA ATCAGCTCCC GTAATATTCT GACCTTCAAG
CCGAGTCAGG TACTTAAGGC AGCTATTAAC GAGCAGGACT GA
|
|---|
| Protein sequence | MTKADLVEKV YLKTGFSKKE SSDIVEMVFD LMKNTLEKGE KIKLAGFGNF VVKQKATRRG
RNPQTGEEIE ISSRNILTFK PSQVLKAAIN EQD
|
|---|
| |