| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1421 |
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| Symbol | rplT |
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| ID | 3723848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1669093 |
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| End bp | 1669449 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637751013 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_356837 |
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| Protein GI | 77919022 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000000000852478 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAGAG TAAAAAGAGG TTTTAAAGCG AGACGTCGTC GTAACAAGGT TTTAAAGCTG
GCTAAAGGCT ATCGCGGCGC ACGTAGTAAA CTGTTTCGTA GTGCAACCGA GGCTGTCGAT
CGGGCACTCA ATTACGCTTT CCGGGATCGG CGCGTTAAAA AACGCGATTT CCGCGCGCTG
TGGATTGCAC GTATCAATGC TTCCGCACGT GAAAACGGTC TTTCCTACAG CCGGTTGGTT
CACGGTCTGA AAAAGGCCGA AATTGCTCTG GATCGCAAGA TCCTGGCAGA ACTCGCTGTG
ACTGACCCTG CAGGTTTTAC CGCCATCGCA GATAAAGCCA AAGCCCAGCT TCAGTGA
|
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| Protein sequence | MPRVKRGFKA RRRRNKVLKL AKGYRGARSK LFRSATEAVD RALNYAFRDR RVKKRDFRAL
WIARINASAR ENGLSYSRLV HGLKKAEIAL DRKILAELAV TDPAGFTAIA DKAKAQLQ
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