Gene Pcar_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1409 
Symbol 
ID3723835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1657374 
End bp1657745 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content50% 
IMG OID637751000 
Producttwo component signal transduction response regulator 
Protein accessionYP_356825 
Protein GI77919010 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00000120114 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACCC GGAAAAAAAT CCTGATTGTC GAAGATGAGG AGAGTCTCCT TCGGTTGGAG 
AGTATTCTGT TGACCTCCAA GGGGTACGAT GTCAAGGGGG TGTCCAATGG CAAGGCGGCT
TTGGAAGCCA TGGCTTCGGA AAAACCCGAT CTGGTTCTGC TTGACATTAT GCTTCCCGAG
ATCGATGGGT TTGAAGTTTG CCGGATCATC AAGGTGACAG AAGAGACCTG TCATATACCT
GTCATCATGC TCACCGCCAA AAAATGTCAG GACGACTTCT CCCGTGGGCA GGAAGTCGGC
GCCGACTGGT ATATTACCAA ACCGTTTAAA TCCGCTATGG TTATCGAGAC CATCCAGCGC
TTTTTGCCCT GA
 
Protein sequence
MVTRKKILIV EDEESLLRLE SILLTSKGYD VKGVSNGKAA LEAMASEKPD LVLLDIMLPE 
IDGFEVCRII KVTEETCHIP VIMLTAKKCQ DDFSRGQEVG ADWYITKPFK SAMVIETIQR
FLP