Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1333 |
Symbol | tpiA |
ID | 3723561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1558226 |
End bp | 1558984 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637750924 |
Product | triosephosphate isomerase |
Protein accession | YP_356752 |
Protein GI | 77918937 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000000000254673 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGAC CCTTTATTGC CGGAAACTGG AAACTGCATA AAACATCGGC GGAGGCCGCG GCCCTGGTGG GAGAGCTGAA AGGCGCGCTG TCCGATGTGG TTGACCGCGA CATTGTCGTG GCTCCCGTAT TCACCTCGTT GGCTGCGGTC ATCGCCACGC TCGAGAAAAG CGACATTTCT GTGGCTGCCC AGAATTGTTA CCCTGAAAAT CAGGGGGCCT TTACGGGCGA AGTGTCGCCA GCCTTGCTGA AAGACGCCGG TTGTCGCTAT GTTATCGTCG GGCATTCCGA GCGCCGCCAG CTTTTCGCCG AATCCGATGC TTTTATCAAC CGCAAAGTCA AGGCTGTTAT CGATGCCGGG CTGTCGGCTA TTTTATGTAT CGGTGAAACG CTGGAGGAGC GGGAGGCGGA CAAGACCTTT GATGTTCTTG AGCGCCAGGT GCGGTGCGGC CTGGAGGGGC TGGATGCGGC TGCCATGGAA CAGATTGTGG TGGCCTATGA GCCTGTATGG GCTATCGGTA CCGGCAAAAC CGCCACCGAC AGTCAGGCTC AGCAGGCGCA CAGCTTTATT CGCAGCCTTG TTAACGATAT CTTCGGTTCC AAAGTGGCTC AACAGGTCAG AATCGTCTAT GGAGGTAGCG TTAAACCCGG CAATGTCGAT GGTCTGCTGC AACAACCCGA TATCGATGGT GCGCTGGTTG GCGGCGCCAG CCTTAACGCC GAAGATTTTA TCCGTATCGT GAAGTTCAAA GCGGTTTAA
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Protein sequence | MRRPFIAGNW KLHKTSAEAA ALVGELKGAL SDVVDRDIVV APVFTSLAAV IATLEKSDIS VAAQNCYPEN QGAFTGEVSP ALLKDAGCRY VIVGHSERRQ LFAESDAFIN RKVKAVIDAG LSAILCIGET LEEREADKTF DVLERQVRCG LEGLDAAAME QIVVAYEPVW AIGTGKTATD SQAQQAHSFI RSLVNDIFGS KVAQQVRIVY GGSVKPGNVD GLLQQPDIDG ALVGGASLNA EDFIRIVKFK AV
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