Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1241 |
Symbol | |
ID | 3723660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1456685 |
End bp | 1458403 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750830 |
Product | acyl-CoA synthetase |
Protein accession | YP_356660 |
Protein GI | 77918845 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 85 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGAGGT ATGGCATGGG CAAGGCAGCT AGTTATTACC ACTGTGGTGG TCTGGAGCCC CTTAAAGGGG AAACCATTCC GGAGCATTTT AACCGGATCG CAAGACACTG TGCTGACAGA GAGGCCATCG TTTCACGCCA TCAGGGACAA CGGATGACCT ATGCCCAACT TGCAGGAGCG TCCGACCGTC TGGCGAGGGG GCTGCTCGGC ATGGGGTATG GGCGCGGCGA CCGTATCGGT GTGTGGGCGA CCAACAGCAT CGAATGGTTG CTGCTGCAGT TGGCCACGGC GCGCATCGGG GTTGCTCTGG TAGCCATCAA TCCCGGCTAC CGGCGGCAGG AAATCGCCTA TGCTCTGCAA CACTCGGAGG TGCACGGGGT TTTCTTCATC CCGGCTTTCC GATCGAGCGA CTATGTGGAG ATACTCGGCA GTATCATTCC TGGGCTGCAT GAGGGCGGAA CGGAACTCAG CCATCCGGAA TTCCCTCATC TGCGACAGGT GGTTCTTTTC GATCCGCAAA ATGCCGAAGC GACCCGTAAG GTGTTGCCGG GCCTGACAGT TTGGCAGGAG GTGCTGGCGG CAGGGGAGGG CGTGACGCGG CAGGATCTCG AAGCCGCCAC CGCTGCCCTC GATCGGGACG ATACCATTGC CCTGCTGTAT ACCTCCGGTT CCATGGGATC ACCGAAAACC GCCGTTCTTT CCCACCATAA CATCCTCAAC AACGCCTGGT TTACCGCCCG GCGCATGGCT TTTACCGAAA CGGACAGACT GTGCGCCCCG GTGCCTTTCT ATCACTGTTT CGGCATGGTA CTGGCCAATC TGGTCTGCAT GGCGGTCGGG GCATGTGTGG TGTTGCCCCA GGAGTATTTC GATCCCCTGG CGACCTTGCA GGCGATCGAG GCCGAAGCTT GCACAACCCT TTACGGTGTG CCGACCATGT TTCTGTCGCA GGTGGAGCAT CCACAGCGTG ACAGCTTCGA TCTGACCAGT TTACGCACCG GCATTATGGG GGGCGCACCG TGTCCGCCGG CGCTGGTACG ACGGGTCATG GACGAGCTGC ATTGCCCCGA AATCCTTATC GGCTACGGTA TGACCGAAGC CTCGCCTTTA ACCCATTTGA CGGCGCCGGA AGATCCTTTG CCGATCCGTT TGGAAACGGT CGGTCGAAAT CTGCCACACC AGGAGGTCAA GCTCATCGAT CCCGACAGCG GAGCCACCGT CGCCATGGGC GAAGTCGGTG AGGTCTGCTT TCGCGGGTAT CATGTCGCCA AGGGATATTA TGGCGATCCC GAGGCCACGG CCCTGGGCAT CGATGCCGAT GGCTGGTTGC ACTCCGGCGA TCTCGGTACC ATGGATGGCG ACGGTTATGT GAAGATCACC GGACGGCGCA AGGAAATCAT CATTCGCGGC GGCGAAAACA TCTGTCCCTG GCAGATCGAA CAACATCTGC TTCAGCATCC CAAGGTGGCC GAGGTGGCGG TATTCGGTTT GCCCGATGAA TTCTACGGGG AGCAGATCAT GGCCTGGGTG CGGCTTGAAA GCGGACAGCA GGCCGACGAG GAAGAGCTAA GGGATTTTTG CAAAGCCGGT CTGGCCCATT TCAAGGTGCC CCGGTATCTC TGGATCGTGG ATGAATTTCC CAAAACCGGC AGCGGCAAGC TGCACAAGCC GCAAATGCGG GAATTGTCGC TGCAAAGGTT GAAAGGCGAT AAGAATTGA
|
Protein sequence | MGRYGMGKAA SYYHCGGLEP LKGETIPEHF NRIARHCADR EAIVSRHQGQ RMTYAQLAGA SDRLARGLLG MGYGRGDRIG VWATNSIEWL LLQLATARIG VALVAINPGY RRQEIAYALQ HSEVHGVFFI PAFRSSDYVE ILGSIIPGLH EGGTELSHPE FPHLRQVVLF DPQNAEATRK VLPGLTVWQE VLAAGEGVTR QDLEAATAAL DRDDTIALLY TSGSMGSPKT AVLSHHNILN NAWFTARRMA FTETDRLCAP VPFYHCFGMV LANLVCMAVG ACVVLPQEYF DPLATLQAIE AEACTTLYGV PTMFLSQVEH PQRDSFDLTS LRTGIMGGAP CPPALVRRVM DELHCPEILI GYGMTEASPL THLTAPEDPL PIRLETVGRN LPHQEVKLID PDSGATVAMG EVGEVCFRGY HVAKGYYGDP EATALGIDAD GWLHSGDLGT MDGDGYVKIT GRRKEIIIRG GENICPWQIE QHLLQHPKVA EVAVFGLPDE FYGEQIMAWV RLESGQQADE EELRDFCKAG LAHFKVPRYL WIVDEFPKTG SGKLHKPQMR ELSLQRLKGD KN
|
| |