Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1228 |
Symbol | |
ID | 3723647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1439917 |
End bp | 1441026 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637750817 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_356647 |
Protein GI | 77918832 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000000000114064 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAT TTTCACTGCT CGCAACCGAC TCTCAAACCG CGGCACGACG TGGCAGACTG ACCACCCCCC ACGGTACCAT CGAGACCCCG ATTTTCATGC CCGTCGGGAC CCACGGCGCC CTCAAAGCCA TGACGCCGGC CCAGGTCGAA GAAACCGGAG CCCAGATTAT TTTGTCCAAC ACCTACCACC TGCATCTGGC GCCCGGAGAG GGTCTGGTGC AGAAAGCCGG GGGGCTGCAC AGCTTCATGA ACTGGCCCCA TCCGATTCTC ACCGACAGCG GCGGTTTTCA GGTCTTTTCC CTGCCCAAAA AACGCATCAC CGAAACCGGC GTATTTTTCC GCCACGAAAT GACCGGGGAA GAAATCTTTC TGGGGCCCGC TGAAGCCATG GCGATCCAGA ACACCCTGGG GGCGGATATC ATCATGGCCT TCGACGAATG CATCCCCTAC CCGGCAACCC ATGATTACGC GGCGAAGTCG ATCCGGAAAA CCCTGCGCTG GGCGGAAGCC TGCCTGCAAA ATCACAATCG TTCCGACCAG GCTCTGTTCG GTATCGTACA GGGTGGAATC TATGAAGACC TGCGTCAGGA ATGCGCGCGG CAGATGACCA CCATGAATTT CCCCGGTTAC GCCATCGGCG GAGTAAGCGT TGGCGAGGGG CTGGATCTGC TGAAAAAGGT GGTCGACTAC ACCGCCCCCA TGCTGCCTGA AAACAAACCG CGCTACCTGA TGGGGGTGGG CTTGCCCGAA GATATTCTGG AAAGCGTGGA ACGCGGCATG GACATGTTCG ACTGCGTCAT ACCGACCCGT TACGCCCGTA GCGCCACGCT CTTTACGCGG CGCGGAAGGA TCCGTTTGAC CAACCGTCGC TATCGCAGAG ACTTTTATCC GGTGGATGCC TCCTGCGATT GTTACTGCTG CCGTAATTTC AGCCGGGCCT ATCTGCATCA CCTGTTCAAA TCGAACGAAA TTCTGTCAGC GACCCTGGCA GCCATCCATA ATGTGCATTT CTATCTGAAT ATGATGAAAG AAGCCCGCCA GGCTATCGAA GCTGGCGACT TTGCCGCATT CAAGAAAAAC TTCCTGGAGG AATACGGCGC CAACAAATAG
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Protein sequence | MFEFSLLATD SQTAARRGRL TTPHGTIETP IFMPVGTHGA LKAMTPAQVE ETGAQIILSN TYHLHLAPGE GLVQKAGGLH SFMNWPHPIL TDSGGFQVFS LPKKRITETG VFFRHEMTGE EIFLGPAEAM AIQNTLGADI IMAFDECIPY PATHDYAAKS IRKTLRWAEA CLQNHNRSDQ ALFGIVQGGI YEDLRQECAR QMTTMNFPGY AIGGVSVGEG LDLLKKVVDY TAPMLPENKP RYLMGVGLPE DILESVERGM DMFDCVIPTR YARSATLFTR RGRIRLTNRR YRRDFYPVDA SCDCYCCRNF SRAYLHHLFK SNEILSATLA AIHNVHFYLN MMKEARQAIE AGDFAAFKKN FLEEYGANK
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