Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1162 |
Symbol | flhA |
ID | 3723737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1358140 |
End bp | 1360224 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637750752 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_356581 |
Protein GI | 77918766 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGATC AATTCAGACA ACAGGACTGG AAAGCGCTCA TTCTCCGTAG CGACGTGATG GTCGCAGTCG GTCTGGTGGC CATCCTCATG GTCATGATTC TGCCACTGCC GTCCTTCATG CTGGATATTT TTCTGTCCCT GAACATCACC ATTGCCCTGT TGATCCTGAT TATCTGCCTT TACACCATGA AGGCCCTGGA GTTTGCCCTA TTTCCCTCGG TGTTGCTGGC CACGACCCTG TTTCGCCTGT CCCTCAATGT GGCATCGACA CGCCTGATCC TGCTGCGGGG CAACGAGGGG CCGGCGGCAG CAGGTTCGGT GATCCAGTCC TTCGGGCAGT TTGTGGTCGG CGGCAATTAT GTCGTCGGCG TGGTGGTCTT CATCATCCTG GTGGTCATCA ATTTCATGGT CATCACCAAA GGCGCCGGTC GTGTGGCCGA AGTCGCCGCC CGCTTCACCC TGGACGCCAT GCCGGGCAAA CAGATGGCCA TCGATGCCGA CCTCAATGCC GGCCTGCTGA CCGAAGCCGA AGCCCGTGAC CGGCGCAAGG AAATTGCCAG CGAAGCGACC TTTTACGGCG CCATGGACGG CGCCAGCAAA TTCGTCAAAG GCGATGCCAT CGCCGGTATC ATCATCACCC TGATCAACAT CGGCGCCGGA TTCATCATCG GCGTGGTGCA AAAAGGCATG GCCCCAGGCG CAGCCGCGGA AACCTATACC ATCCTTACCG TCGGCGACGG CCTGGTGGGA CAGATTCCGG CCCTGATCAT ATCCACCGCG GCCGGCATCC TGGTCACCCG CACCGCCGGC GAACAGGATT TCGGCGGCGC CCTCAAATCG CAGTTCACCA TCCATCCCCA GGCATTGTGG GTGGTTTCCG GCATCCTGCT GGCTTTTGCC CTGATTCCCG GCCTGCCGAC CATCCCCTTT CTGGTATTGT CCACAGCATT GGCCTTCGCC GCCTACAACG TCCAGAAAGC CAAGGCCGAC CAGGATATGG TTCGTCAACA GGAAGAGCGG CAACCCCAGG CGCCCGAGGA AGAAAACTAC GAAGACATGC TGTCCGTCGA CCTGCTGGAA CTCGAGGTCG GATACGGCCT GATCCCCATG GTCGATGCCA ACCAGAACGG CGAATTATTG CCCCGAATCC GCTCTATCCG CAAACAGTTC GCTCTCGATT TCGGATTCAT CATCCCGCCG ATTCACATCA AGGACAATCT GCAACTCAAA CCCAATGAAT ATGCCGTACT GCTCAAAGGC ATGCGCATTG CCAGCGGCGA GATTCTGCCC AACCATCATC TGGCCATGAA TCCCGGTATC GCCACGGAAC CCCTCAAAGG GGTAGCCACC ACCGAGCCGG CTTTCGGTCT GCCCGCCACA TGGATTGGCG AAGACCTCAA GGAACGGGCT CAGATTGCCG GTTACACCGT GGTCGACGGC ACCACGGTGA TCACGACCCA CATTACCGAA ATCATAAAAA AGCACGCTCA TGAACTCATT GGACGCCAAG AGGTACAGAA CTTGCTAGAT AACCTTGGCA AGAGCTTCCC GAAACTGGTC GAGGAGCTGA CGCCAAATCT CTTACCTCTT GGATCTATTA TGAAAGTTCT ACAGAATCTG CTTCGTGAAC AGGTGTCCAT ACGGGACCTG CGAACTATTC TGGAGACCCT GGCCGACTGG GGCGGCGCCA CCAAGGATCC GGACCTGCTG ACCGAACAGG TCCGCCAGGC CATGGCCCGC GCCATCAGCG GCCGACATGC GCAGGACGAT GAACTGCTGG AGTTGATGAC GTTGGATCAC CAACTGGAGG AAACCATCGA GCAGGCGGTG CATCGCACCA ACGAAGGCAG CTACCTGGCG CTCGATCCGG GTACGGCCCA GACCTTCCTG GAAAACCTGG CGAATGCCAT GCAGTCGTTG AACGGCGGGG CCACACCCAT CCTGCTATGC ACGCCAACAA TTCGACCCCA TGTCAAGCGC TTGACCGAGC GTTACCTGCC CAACCTGGTG TGCCTGTCCC ATAATGAAAT TTCCCCTCAC CTGAGGGTGC AATCGGTAGG AACGGTGACT GCCCATGCTG GTTAG
|
Protein sequence | MLDQFRQQDW KALILRSDVM VAVGLVAILM VMILPLPSFM LDIFLSLNIT IALLILIICL YTMKALEFAL FPSVLLATTL FRLSLNVAST RLILLRGNEG PAAAGSVIQS FGQFVVGGNY VVGVVVFIIL VVINFMVITK GAGRVAEVAA RFTLDAMPGK QMAIDADLNA GLLTEAEARD RRKEIASEAT FYGAMDGASK FVKGDAIAGI IITLINIGAG FIIGVVQKGM APGAAAETYT ILTVGDGLVG QIPALIISTA AGILVTRTAG EQDFGGALKS QFTIHPQALW VVSGILLAFA LIPGLPTIPF LVLSTALAFA AYNVQKAKAD QDMVRQQEER QPQAPEEENY EDMLSVDLLE LEVGYGLIPM VDANQNGELL PRIRSIRKQF ALDFGFIIPP IHIKDNLQLK PNEYAVLLKG MRIASGEILP NHHLAMNPGI ATEPLKGVAT TEPAFGLPAT WIGEDLKERA QIAGYTVVDG TTVITTHITE IIKKHAHELI GRQEVQNLLD NLGKSFPKLV EELTPNLLPL GSIMKVLQNL LREQVSIRDL RTILETLADW GGATKDPDLL TEQVRQAMAR AISGRHAQDD ELLELMTLDH QLEETIEQAV HRTNEGSYLA LDPGTAQTFL ENLANAMQSL NGGATPILLC TPTIRPHVKR LTERYLPNLV CLSHNEISPH LRVQSVGTVT AHAG
|
| |