Gene Pcar_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1162 
SymbolflhA 
ID3723737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1358140 
End bp1360224 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content58% 
IMG OID637750752 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_356581 
Protein GI77918766 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATC AATTCAGACA ACAGGACTGG AAAGCGCTCA TTCTCCGTAG CGACGTGATG 
GTCGCAGTCG GTCTGGTGGC CATCCTCATG GTCATGATTC TGCCACTGCC GTCCTTCATG
CTGGATATTT TTCTGTCCCT GAACATCACC ATTGCCCTGT TGATCCTGAT TATCTGCCTT
TACACCATGA AGGCCCTGGA GTTTGCCCTA TTTCCCTCGG TGTTGCTGGC CACGACCCTG
TTTCGCCTGT CCCTCAATGT GGCATCGACA CGCCTGATCC TGCTGCGGGG CAACGAGGGG
CCGGCGGCAG CAGGTTCGGT GATCCAGTCC TTCGGGCAGT TTGTGGTCGG CGGCAATTAT
GTCGTCGGCG TGGTGGTCTT CATCATCCTG GTGGTCATCA ATTTCATGGT CATCACCAAA
GGCGCCGGTC GTGTGGCCGA AGTCGCCGCC CGCTTCACCC TGGACGCCAT GCCGGGCAAA
CAGATGGCCA TCGATGCCGA CCTCAATGCC GGCCTGCTGA CCGAAGCCGA AGCCCGTGAC
CGGCGCAAGG AAATTGCCAG CGAAGCGACC TTTTACGGCG CCATGGACGG CGCCAGCAAA
TTCGTCAAAG GCGATGCCAT CGCCGGTATC ATCATCACCC TGATCAACAT CGGCGCCGGA
TTCATCATCG GCGTGGTGCA AAAAGGCATG GCCCCAGGCG CAGCCGCGGA AACCTATACC
ATCCTTACCG TCGGCGACGG CCTGGTGGGA CAGATTCCGG CCCTGATCAT ATCCACCGCG
GCCGGCATCC TGGTCACCCG CACCGCCGGC GAACAGGATT TCGGCGGCGC CCTCAAATCG
CAGTTCACCA TCCATCCCCA GGCATTGTGG GTGGTTTCCG GCATCCTGCT GGCTTTTGCC
CTGATTCCCG GCCTGCCGAC CATCCCCTTT CTGGTATTGT CCACAGCATT GGCCTTCGCC
GCCTACAACG TCCAGAAAGC CAAGGCCGAC CAGGATATGG TTCGTCAACA GGAAGAGCGG
CAACCCCAGG CGCCCGAGGA AGAAAACTAC GAAGACATGC TGTCCGTCGA CCTGCTGGAA
CTCGAGGTCG GATACGGCCT GATCCCCATG GTCGATGCCA ACCAGAACGG CGAATTATTG
CCCCGAATCC GCTCTATCCG CAAACAGTTC GCTCTCGATT TCGGATTCAT CATCCCGCCG
ATTCACATCA AGGACAATCT GCAACTCAAA CCCAATGAAT ATGCCGTACT GCTCAAAGGC
ATGCGCATTG CCAGCGGCGA GATTCTGCCC AACCATCATC TGGCCATGAA TCCCGGTATC
GCCACGGAAC CCCTCAAAGG GGTAGCCACC ACCGAGCCGG CTTTCGGTCT GCCCGCCACA
TGGATTGGCG AAGACCTCAA GGAACGGGCT CAGATTGCCG GTTACACCGT GGTCGACGGC
ACCACGGTGA TCACGACCCA CATTACCGAA ATCATAAAAA AGCACGCTCA TGAACTCATT
GGACGCCAAG AGGTACAGAA CTTGCTAGAT AACCTTGGCA AGAGCTTCCC GAAACTGGTC
GAGGAGCTGA CGCCAAATCT CTTACCTCTT GGATCTATTA TGAAAGTTCT ACAGAATCTG
CTTCGTGAAC AGGTGTCCAT ACGGGACCTG CGAACTATTC TGGAGACCCT GGCCGACTGG
GGCGGCGCCA CCAAGGATCC GGACCTGCTG ACCGAACAGG TCCGCCAGGC CATGGCCCGC
GCCATCAGCG GCCGACATGC GCAGGACGAT GAACTGCTGG AGTTGATGAC GTTGGATCAC
CAACTGGAGG AAACCATCGA GCAGGCGGTG CATCGCACCA ACGAAGGCAG CTACCTGGCG
CTCGATCCGG GTACGGCCCA GACCTTCCTG GAAAACCTGG CGAATGCCAT GCAGTCGTTG
AACGGCGGGG CCACACCCAT CCTGCTATGC ACGCCAACAA TTCGACCCCA TGTCAAGCGC
TTGACCGAGC GTTACCTGCC CAACCTGGTG TGCCTGTCCC ATAATGAAAT TTCCCCTCAC
CTGAGGGTGC AATCGGTAGG AACGGTGACT GCCCATGCTG GTTAG
 
Protein sequence
MLDQFRQQDW KALILRSDVM VAVGLVAILM VMILPLPSFM LDIFLSLNIT IALLILIICL 
YTMKALEFAL FPSVLLATTL FRLSLNVAST RLILLRGNEG PAAAGSVIQS FGQFVVGGNY
VVGVVVFIIL VVINFMVITK GAGRVAEVAA RFTLDAMPGK QMAIDADLNA GLLTEAEARD
RRKEIASEAT FYGAMDGASK FVKGDAIAGI IITLINIGAG FIIGVVQKGM APGAAAETYT
ILTVGDGLVG QIPALIISTA AGILVTRTAG EQDFGGALKS QFTIHPQALW VVSGILLAFA
LIPGLPTIPF LVLSTALAFA AYNVQKAKAD QDMVRQQEER QPQAPEEENY EDMLSVDLLE
LEVGYGLIPM VDANQNGELL PRIRSIRKQF ALDFGFIIPP IHIKDNLQLK PNEYAVLLKG
MRIASGEILP NHHLAMNPGI ATEPLKGVAT TEPAFGLPAT WIGEDLKERA QIAGYTVVDG
TTVITTHITE IIKKHAHELI GRQEVQNLLD NLGKSFPKLV EELTPNLLPL GSIMKVLQNL
LREQVSIRDL RTILETLADW GGATKDPDLL TEQVRQAMAR AISGRHAQDD ELLELMTLDH
QLEETIEQAV HRTNEGSYLA LDPGTAQTFL ENLANAMQSL NGGATPILLC TPTIRPHVKR
LTERYLPNLV CLSHNEISPH LRVQSVGTVT AHAG