Gene Pcar_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1080 
Symbol 
ID3723904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1269993 
End bp1270487 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content57% 
IMG OID637750671 
Producthypothetical protein 
Protein accessionYP_356500 
Protein GI77918685 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC TGACATTGAT TTTCATCCTT ACGACGCTCG CCGCGTCCGT TGTGTATGCC 
GGTTCCGAAA AAACTCCCGA ACCGGAAAAA AAATCTCAAG TAGCCTACCG GGCCGAGTCG
CAACAGTCTT TCAAAGGGCC AGAAAAGTGG TTCACCGGTA ACGTGCAGGT CGACCTGCTG
TTCCCAGCCA ACGAAACCGC CCATTACTCC GGCGCCTATG TCACCTTTCA GCCGGGTGCC
AGAACCGCCT GGCACCTGCA TCCTGCGGGA CAGCATATGA TCGTTACTTC CGGTGTCGCC
CTGACCGGGA CGCGGGATGG CAGGATGATG CGCTTCAAAG CCGGTGACAC AGTCTGGTGC
CCGCGCGGCA TCGACCACTG GCACGGTGCC ACGCCCGACG CTCCCATGAC CCACCTGGTC
ATTACCGGCG CCCTCAATGG TCAAAACGTG GTCTGGAAGG AAAAAGTCAC CGACGAGCAG
TACAATGGCA AATAA
 
Protein sequence
MKKLTLIFIL TTLAASVVYA GSEKTPEPEK KSQVAYRAES QQSFKGPEKW FTGNVQVDLL 
FPANETAHYS GAYVTFQPGA RTAWHLHPAG QHMIVTSGVA LTGTRDGRMM RFKAGDTVWC
PRGIDHWHGA TPDAPMTHLV ITGALNGQNV VWKEKVTDEQ YNGK