Gene Pcar_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1006 
Symbol 
ID3723984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1177685 
End bp1178917 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content52% 
IMG OID637750598 
Productaspartate kinase 
Protein accessionYP_356427 
Protein GI77918612 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000000423126 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGG TAGTACAGAA GTATGGGGGG ACATCGGTCG GTGATGTTGA CCGGATCCGC 
AATGTCGCCC GGCGCGTTGC CAAAACCTAC GACGACGGAA ATGACGTGGT CGTGGTTGTG
TCGGCTATGT CCGGAGAAAC CAATAAACTG GTGGCTCTGG CCAATGAATT ATGCGATTTT
CCCAGTGAAC GTGAATATGA CGTACTGGTG TCGACGGGCG AACAGGTGAC TATTGCTTTG
CTTTCCATGT GTTTGCAGTC CATGGGTTAC AAGGCAAAAA GTTATCTGGG CCATCAGATT
CCCATCTTTA CGGACAGCAC TTTCAGCAAG GCGCGTATCG AAAGCATCGA CGACAAGAAT
ATCCGTGAAG ATCTCAATAA CGGCACGATC ATTGTCGTAG CCGGTTTCCA GGGTATCGAC
CATGACGGCA ACCTCACCAC CCTGGGACGG GGCGGTTCCG ACACCTCCGC CGTCGCGGTG
GCCGCCGCTC TTAAAGCCGA TGTCTGTGAG ATTTATACCG ATGTGGACGG CGTCTATACG
ACCGATCCCC GGATTGTGGC GGATGCCACC AAAATCGAGA AAATTTCCTA CGACGAGATG
CTCGAAATGG CTTCCCTCGG AGCCAAGGTA TTACAGATAC GTTCGGTGGA ATTCGCCAAA
AAATACGGCG TGATCGTGCA CGTGCGTTCC AGTTTTAACG ATAATCCAGG GACCCTGGTT
ACCAAGGAGG ACGAGGATAT GGAAACCGTT CTGGTTTCGG GCGTTACATA CAATAAAGAC
GAAGCGAAGA TTTCCGTGAT GGGTGTGCCT GACAAGCCTG GTGTCGCCGC CAAGCTGTTC
ACTCCCCTGA CCACTTCGAA TATTACCGTT GACATGATTA TCCAGAATGT GTCCAACGAC
GGACTTACCG ATCTGACTTT CACAGTGCCG CGCGGCGATT TCAAGAAGGC TCTCAAGGCC
GTCGAGGAAA CCGCCCGGGA AATCGGTGCG GCCGGTGTGC GCAGCGATGA AAATATCGCC
AAGGTATCCA TTGTCGGGGT CGGAATGCGT TCCCACTCCG GGATTGCCAG CAAGATGTTC
CGGGTTCTTT CCCAGGAAGG TATCAACATC CAGATGATCT CAACCAGCGA GATCAAAGTT
TCCTGTGTTA TTGATGCCAA ATATACGGAA TTGGCAATTC GTGTACTGCA CCAGGCTTTT
GGTCTGGATA AAAAAGATAG CAAGGCCGAA TAA
 
Protein sequence
MALVVQKYGG TSVGDVDRIR NVARRVAKTY DDGNDVVVVV SAMSGETNKL VALANELCDF 
PSEREYDVLV STGEQVTIAL LSMCLQSMGY KAKSYLGHQI PIFTDSTFSK ARIESIDDKN
IREDLNNGTI IVVAGFQGID HDGNLTTLGR GGSDTSAVAV AAALKADVCE IYTDVDGVYT
TDPRIVADAT KIEKISYDEM LEMASLGAKV LQIRSVEFAK KYGVIVHVRS SFNDNPGTLV
TKEDEDMETV LVSGVTYNKD EAKISVMGVP DKPGVAAKLF TPLTTSNITV DMIIQNVSND
GLTDLTFTVP RGDFKKALKA VEETAREIGA AGVRSDENIA KVSIVGVGMR SHSGIASKMF
RVLSQEGINI QMISTSEIKV SCVIDAKYTE LAIRVLHQAF GLDKKDSKAE