| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0852 |
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| Symbol | cirA |
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| ID | 3722850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1005192 |
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| End bp | 1007093 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637750446 |
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| Product | TonB-dependent outer membrane receptor for Fe3+/colicin I |
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| Protein accession | YP_356278 |
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| Protein GI | 77918463 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000258389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATG TTTTTATTGC GATGAGTGTG CTTTGCATCA TGATGTGCGC CAACCGAACC
TTGGCCGACC AGGTCAATGA CGACCAGGAG GTCTTTGAAA CCGAAAAAAT GGTGGTCACC
GCTACCATGA CGGAAAAGAT CATGAAAGAT GCACCGGGAG CCATCGAGGT CATCAGCGCA
CAGGAAATCC TTGAAATGAA TGCGCAAACC GTGTCCGAGG CGATCGAGGA AGCTACCGGC
CTGCTGGTAA CGACGGAGAC GGGACGACAG AAAAGACCGA GTATCCGCGG CACGGGCGAC
AAACACACCC TGGTGCTGAT CGACGGACGC CGGGTCGTGG CCGGCTTCAA GGATCTGCTC
AGCATCAATC AACTCCCCGT GGATCTGATC GATCACATCG AAGTGGTACG CGGCCCCGCA
TCGGCTTTGT ACGGCAGCGA CGCCATCGGC GGGGTGGTCA ACATCATCAC CCGACGGCCC
ACCAGACGAT TGGCCCTGGG CGCCACCGCG CAATACGGGC AGAACGGTTA TCACGAAGGG
GAAAAAACCA GGGGCCGGGC TTATGTCGGC AAGGCCACGG AACGTTTCGG CGTCTTTCTG
GCCGGCGGCT ACCAGAAACA AAACGCCTTT GACCGCGACG GCGTCACGCC CGACGACAGC
GACACGATCA AGCTCAAATC GGTCGGCGGA CGCTTCACCT TCAGCCTCGC TGAAGGGCAC
GAGCTGCTGG CGGGTTTCGA AGCCATGGAC CGGGAACTGT CCGGCCTCAG GGATCTTATG
AATATGGACC GGTTGCGAAC CGTCGAGGAG GAGCGCTTAA ACGGCTTTCT TCAGTACGAC
GCCAAAATCA CGTCCCTCTC CAGACTGATG CTGCGGTTCA ATCATTCCGA ACAGGAAAAC
GAAGTCGATA CGGATCCAGC CATCCCGGAG GTAAGCGGCG CCATCGGCAA CGAATCGGAT
GCGAAACGCT GGCTGGACCA GATCGAGGGA CGATACAGCG GCCTGTTCTA CGATCGTCAC
CTGATTACCG TGGGCACCGA ATACCGGGTC GAGGGACGCA AGGATGATGC CGGTCTGGAC
GACGATATCC ATAACCTCAG CTTCTACGGT CAGGACGAAT ACCGGGTTTT CGATCCCCTC
TACCTGGTGG TCGGCTGCCG CTGGGACGAG CATTCCGAGT TCGGCTCCGA ATGGACGCCC
CGAGTCTCCG CCACCTACCA CATCCTGGAC AACCTCAGAC TCAAAGCATC CTACGGCAGG
GGCTTCCGCG CCCCCGGGTT TATGGAGTTG TACGTCCCCA CCTACATGAA ACAGGGCAAG
CAGATCTGCG AACCCAACGC TGATCTCGAC GCCGAGACCT CCGACAGCTA CGAAGTCGGC
ATCGAAGGCG AGTACGGACG CTTTCAGGGC CGCTTCATGT GGTTCTATAC GGAAATCGAC
GATCTTATCG ATGCGGTCTG GTACATGTCC ACCGGCTCGG GCAAGAAAAA AAAGGACTAT
TACCAGTACC AGAACATCGC CGAAGCGACC ATGGAAGGGG TCGAATTCGA GGGACGTCTG
AAACTGCCTT ACGGCTTCGC CCTGACGGGC AACATAACCT ACCTGGATAC GGAAGACAAA
GATACGGGCA AGGATCTGGA GGGTCGCCCC GACTATAAGG GAACCCTGAA ACTGAGCTAC
CGCCAGCCGC TTTCGGGATG GGCTGCGAAT ATCCGCTTCA ACTATATCGG CGAGCGCTAC
TACTCCGGCG GAGACGAGGA TGACGTCTTC CTGGTGAACA CCTACCTGGC AAAAAACATC
ACCCGGCAAT GGAAAGTCTT CGCCGGCGTG GACAATATCT TCAATACCGG CACAACCCGG
GAACCGATGT TCTGGTACAG CGGGGTTTCC TACGATTACT GA
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| Protein sequence | MKNVFIAMSV LCIMMCANRT LADQVNDDQE VFETEKMVVT ATMTEKIMKD APGAIEVISA
QEILEMNAQT VSEAIEEATG LLVTTETGRQ KRPSIRGTGD KHTLVLIDGR RVVAGFKDLL
SINQLPVDLI DHIEVVRGPA SALYGSDAIG GVVNIITRRP TRRLALGATA QYGQNGYHEG
EKTRGRAYVG KATERFGVFL AGGYQKQNAF DRDGVTPDDS DTIKLKSVGG RFTFSLAEGH
ELLAGFEAMD RELSGLRDLM NMDRLRTVEE ERLNGFLQYD AKITSLSRLM LRFNHSEQEN
EVDTDPAIPE VSGAIGNESD AKRWLDQIEG RYSGLFYDRH LITVGTEYRV EGRKDDAGLD
DDIHNLSFYG QDEYRVFDPL YLVVGCRWDE HSEFGSEWTP RVSATYHILD NLRLKASYGR
GFRAPGFMEL YVPTYMKQGK QICEPNADLD AETSDSYEVG IEGEYGRFQG RFMWFYTEID
DLIDAVWYMS TGSGKKKKDY YQYQNIAEAT MEGVEFEGRL KLPYGFALTG NITYLDTEDK
DTGKDLEGRP DYKGTLKLSY RQPLSGWAAN IRFNYIGERY YSGGDEDDVF LVNTYLAKNI
TRQWKVFAGV DNIFNTGTTR EPMFWYSGVS YDY
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