Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0814 |
Symbol | |
ID | 3723095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 960585 |
End bp | 962024 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637750408 |
Product | outer membrane protein |
Protein accession | YP_356241 |
Protein GI | 77918426 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATACGA TACGTTGCGT TCGCACCATG TTTGTTCTGG CCTGTCTCGG GCTTACCGCC TGCGTGGCTG TCGGGCCGGA TTACGTTCCG CCGGTGGCGG ATGTACCGGC AACCTGGAGT ATGGCGACCG ATAACCAGGG ACAAGCTGCC GAACCGGGTG ACCTGAGTCG CTGGTGGGAG GAGTTCAACG ATCCGGTGCT TAACGACCTG GTAACCGATG CGCTGACGGC CAACTTGGAT CTGGCCACGG CCAGGGCGCA GCTGCGCGAG GCACGGGCGC AACGTGCCTT GGCTGGATCT CAGCTCGGGC CTTCGGTGGA CGTGGCGACC TCGGCTTCCC GCAGCCAGTC GAGCGAAGAA AGCGGATCAG GCTCCACCAG TGAGTTATAC AGCGCCGGGT TCGATGCGAG CTGGGAGGCG GATGTCTTCG GCGGCCTGCG TCGCGGTGTG GAAGCGGCGG CGGCCGACGT CGATGCCAGT GTCGAGAGTC TGCGCGATAC GCAGGTTTCG CTGGTTGCCG AAGTGGTCCT TAACTATGTG GATCTGCGTA CCGCCGAGCG TCGCCTGAGT GTTGCGGAGA ATAATATTGC TTCTCTGAGC GAAACCTATC GACTTGCCGG CTGGCGTCTC CAGGCAGGAT TGGTTTCCGA GCTGGATGTT GCTCAGGCCC GCACCGAGCT GGAAAGTACG CGGGCAAGTC TGCCCGCGTT GCGGACAACC AGGGCGGAGG CTCGTAACCG GCTTGCCGTA CTGCTGGGCA GTTCCCCCGC TGAACTGGGC TCCCGGCTGG AGTCTGCCGG CGCGATTCCG TTGGCCGAGC GTGCTGCGGC GGTCGGTATC CCGGCCGATA TCCTGCGTCA GCGTCCCGAT GTGCGTGCCG CCGAGCGCCA ATTGGCGGCG CAGACTGCGC GGCTGGGCGA GGCTGAAGCG GAACGTTATC CGAGTTTCAA GCTGTCCGGT TCTATCGGGC TGGAAGCTCT TACCTTGTCG GCGCTTAGCA ATGGCGGTGC CGCCGTCTAC TCGTTGCTGG GCTCGATCAC CGCGCCGATT TTCGACTCCG GGCGCATCAG GGCCAATATC GAGACCCAGG ATGCCCTGCT CGAACAGACT CGGCTGGCCT ACAAGGCGGC GGTGCTGACC GCCCTTGAAG ATGTGGAGAA TGCGCTGGTT GCGGTCAACA ATGCCGGCAA AAGGCGAGAG ACGCTGACGT TGGCAGCCGA CTCGGCCCGC GAAACGCTGC AACTGGCCGA GCAGCGTTAC GCGGGTGGTC TTGTCGACTT TCTCACCGTA CTCGATAGCC AGCGAACTCT GCTCGGTCTC GAGGACGACC TCGCCAGCAG TGCTGGGGAT CTGGCCGGTG CGCAGATTCA ACTCTACAAG GCCCTTGGCG GCGGCTGGTC GCCGGAGCCT CAAACGGAAG ATAACAGGGA CGCGTCATGA
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Protein sequence | MNTIRCVRTM FVLACLGLTA CVAVGPDYVP PVADVPATWS MATDNQGQAA EPGDLSRWWE EFNDPVLNDL VTDALTANLD LATARAQLRE ARAQRALAGS QLGPSVDVAT SASRSQSSEE SGSGSTSELY SAGFDASWEA DVFGGLRRGV EAAAADVDAS VESLRDTQVS LVAEVVLNYV DLRTAERRLS VAENNIASLS ETYRLAGWRL QAGLVSELDV AQARTELEST RASLPALRTT RAEARNRLAV LLGSSPAELG SRLESAGAIP LAERAAAVGI PADILRQRPD VRAAERQLAA QTARLGEAEA ERYPSFKLSG SIGLEALTLS ALSNGGAAVY SLLGSITAPI FDSGRIRANI ETQDALLEQT RLAYKAAVLT ALEDVENALV AVNNAGKRRE TLTLAADSAR ETLQLAEQRY AGGLVDFLTV LDSQRTLLGL EDDLASSAGD LAGAQIQLYK ALGGGWSPEP QTEDNRDAS
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