| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0730 |
|---|
| Symbol | trpE |
|---|
| ID | 3722936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 868037 |
|---|
| End bp | 869521 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637750321 |
|---|
| Product | anthranilate synthase, component I |
|---|
| Protein accession | YP_356159 |
|---|
| Protein GI | 77918344 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00564] anthranilate synthase component I, non-proteobacterial lineages |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTATC CAAGTATTGA AGAATTTTCC GAATTAGCTC AGCAGGGCAA TCTTATACCC
GTCTACCGGG AAATTCTGGC GGATATGGAA ACGCCAGTTT CCGCCTTTCG GAAAATAGAC
GATAACAAAA CGGCATTTTT GCTGGAAAGT ATCGCAGGCG GCGAGAAGTG GGCCCGATAT
TCCTTTCTTG GCAGCGGTCC ATGCAAGATT TTTCGGTGTC GTGGAAAACG CTGGGAATTG
CTTGACGACA ACCATGTCAT CGATAGTGGT GAAGCTTCGC AACCTCTCGA GGTTCTTCGG
AGTATCATGG GTAAATATCA CGTCGTACCG GTTGATGGGC TGCCCCGCTT TTTCGGTGGT
ATGGTCGGCT ATTGCGGCTA TGACACGGTG CGCTACTTCG AACAGTTGCC CGATAATGCT
CCGAGTAAAA TCGGCACCTA CGATGCCTGT TTTATTCTGA CCGAAAAACT GTTGATTTTC
GATAACTTGC GCCAGGTTAT CAAAGTCGTT TGCAATGTGC ATGTCGAAGA TGGGGGATGT
CCTGCAACAG CTTATAAACA GGGTGTCCTG GCCATCGATC AACTTGTTGA GCGTCTGCGA
CGGCCGTTGC CGGGAGCCAA GCAAACCTCG GCTGCGAAAA ATCCTATATC CTTTTCTTCC
AATTACAGTC GCGAGGCATT TATGGCGGCT GTGGAGCGCT GCAAAGAATA TGTCCGCGCC
GGTGATATCA TTCAGGTCGT TCTTTCCCAG CGATTTTCCG GGGTCCTGGG TGATTGCGAG
CCGTTTGATA TCTATAGGGC TCTGAGAACG CTCAATCCTT CTCCCTATAT GTTCTTTTTG
CGTTTTGATG ACACTCTGGT TATCGGCGCT TCTCCCGAGG TACTCGTGCG TAAGGAAGGA
ACCATGGCTG AAGTGCGGCC CATCGCCGGT ACCCGCCCGC GCGGACGCGA TGCTGCCGAA
GATCTTGCTT TGGAAAAAGA GCTGTTGGAG GATCCCAAGG AATTGGCCGA ACACATCATG
CTGGTCGATC TGGGTCGCAA CGATCTGGGG CGGGTCTGCC GTACAGGTTC TGTCGAGGTC
AGCGAATTGA AGGTTATTGA GCGGTATTCG CACGTTATGC ATATCGTTTC CAATGTCCGA
GGGCAACTTG CCGACGACCT CGATGCGTTT GATGTGCTGA GTGCGACGTT TCCGGCAGGT
ACGCTCAGTG GTGCGCCTAA AATCAGGGCG ATGCAGATCA TTGACGAGCT TGAACCCTCA
CGTAGGGAAA TTTACGGCGG CGCCGTGGGA TATTTCTCTT TTTCCGGAAA TATGGATATG
GCCATAGCCA TTCGCACTTT GGTCGTTCAT AACGGTAAGA TTCATTTGCA GGCAGGGGCC
GGAATCGTGG CAGACTCAGA TCCGGCATCC GAATACGAGG AAACCTTGAA CAAGGCACGC
GGTGCCATGA AAGCCGTTGA GATGGCTTGT GAAGGGCTGG ACTGA
|
|---|
| Protein sequence | MYYPSIEEFS ELAQQGNLIP VYREILADME TPVSAFRKID DNKTAFLLES IAGGEKWARY
SFLGSGPCKI FRCRGKRWEL LDDNHVIDSG EASQPLEVLR SIMGKYHVVP VDGLPRFFGG
MVGYCGYDTV RYFEQLPDNA PSKIGTYDAC FILTEKLLIF DNLRQVIKVV CNVHVEDGGC
PATAYKQGVL AIDQLVERLR RPLPGAKQTS AAKNPISFSS NYSREAFMAA VERCKEYVRA
GDIIQVVLSQ RFSGVLGDCE PFDIYRALRT LNPSPYMFFL RFDDTLVIGA SPEVLVRKEG
TMAEVRPIAG TRPRGRDAAE DLALEKELLE DPKELAEHIM LVDLGRNDLG RVCRTGSVEV
SELKVIERYS HVMHIVSNVR GQLADDLDAF DVLSATFPAG TLSGAPKIRA MQIIDELEPS
RREIYGGAVG YFSFSGNMDM AIAIRTLVVH NGKIHLQAGA GIVADSDPAS EYEETLNKAR
GAMKAVEMAC EGLD
|
|---|
| |