| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0634 |
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| Symbol | |
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| ID | 3724049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 764391 |
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| End bp | 765803 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637750219 |
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| Product | response regulator |
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| Protein accession | YP_356063 |
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| Protein GI | 77918248 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.00145352 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TCCTCATCAT TGATCAACAG GATTTTTCCC GGATTGAATT AAAGAACTTC
CTGGATTCTG AATATCTTGT CATAGAATCA AAAAATGAAA AAGAAGCGCT TGAACAAATC
GACCACCATC ATCCGGACCT GGTTATCCTG GATATGGATA TCATAGGCGA AAACAGTCCC
AATTTATGTT TAAAACTCAA AAGATCCAAA GGATTAAAAA ACGTCCCATT GATACTGTTA
TTTTCGAGTG AACATAAGGA GGCTATTGTT AATGGTCTGC ATTCCGGCGC AGACGACTAC
CTGACCAAGC CATTCAATCG AAATGATCTT TTATCAAGAA TCGAAATCCA TCTCCGCACT
CAAAATTATT ATTCGGATCT CCGGAAAAAC GATTTACTCA TGTTGCTGGA GTTAACGGAG
ACCATTTCCG TTACCAGAAA CCCCAGAAGG ATTCTCTCCA TCATCGTTGA AAGACTGATC
AAAACAATCG ACGTCTCACG ATGTTCTATT ATCGGGATCA ATGACTTCGG TGAATTGCTG
GTATTGGCCA GCAGCGATCT GCCGGAAAAT CAGGAAATCA AGCTCGATTT GAAGAAATAT
CCGGAAATCG AAAAAGCGCT GGAAACCCAG CGCCCCGTCG TTTTGCAAGA TATCACCAAT
AGCGCCCTTA TGAAACCGGT CAAAAAACAC ATCGAGGCTT TGTCGGACAA TGCGGTTTTC
GTCGTGCCGA TTATCAAGAA GCAAAACGTG ATCGGGACCT TTTTCCTGCG AACCGCATGC
CTGCAAAAAG GGGGCATCAC CGACAGAATT TTCAAGTTGT GTCAGGTCAT CGCCAGCATA
TCGGGAAACG CCCTTGAGAA TGCGATTATT TTTGAGTCCA TGGAGACGAA CAAGAAGCTG
CTCGAGGATT TATCCGTACG GGACAGTCTG ACGAAACTGT ATAATCATCA GCATTATCAT
TCACGGCTGG AGGACGAGTT TTCCAGGGCG CAGCGCTACA ATCTGGATTT GTCCTGTATC
TTTTTGGATA TCGACAATTT CAAAAATATC AATGACCGCT ATGGGCACCT CGCCGGCGAC
ATGGTGCTAC GGCAAATTGC CCGACTCATC AGCCAGGTTA TCCGTAAAAG TGACATCTCC
GCACGTTATG GCGGTGAAGA GTTCGCCATA TGCCTCCCCA ACACCGGCGG TGTTGCCGCA
AACGAACTGG CGGAAAGACT CCTGGTGATG ATCCGGGAGC TTTCCATTCA ACAACTCAAA
GGGGAACATG TCACGGTCAG CATAGGTACC TCGACCTATA GCAACCATAA CGTGGCGTCC
TATAGCGAAT TGCTCCACCT CGCCGACGAC GCCATGTACG AGGCCAAGAA ATCAGGAAAA
AATCGGTTCT GTTGTTCCAC CGCTATGTTT TAA
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| Protein sequence | MKKILIIDQQ DFSRIELKNF LDSEYLVIES KNEKEALEQI DHHHPDLVIL DMDIIGENSP
NLCLKLKRSK GLKNVPLILL FSSEHKEAIV NGLHSGADDY LTKPFNRNDL LSRIEIHLRT
QNYYSDLRKN DLLMLLELTE TISVTRNPRR ILSIIVERLI KTIDVSRCSI IGINDFGELL
VLASSDLPEN QEIKLDLKKY PEIEKALETQ RPVVLQDITN SALMKPVKKH IEALSDNAVF
VVPIIKKQNV IGTFFLRTAC LQKGGITDRI FKLCQVIASI SGNALENAII FESMETNKKL
LEDLSVRDSL TKLYNHQHYH SRLEDEFSRA QRYNLDLSCI FLDIDNFKNI NDRYGHLAGD
MVLRQIARLI SQVIRKSDIS ARYGGEEFAI CLPNTGGVAA NELAERLLVM IRELSIQQLK
GEHVTVSIGT STYSNHNVAS YSELLHLADD AMYEAKKSGK NRFCCSTAMF
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