| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0561 |
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| Symbol | |
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| ID | 3723466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 683212 |
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| End bp | 684786 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637750147 |
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| Product | sugar kinase domain-containing protein |
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| Protein accession | YP_355991 |
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| Protein GI | 77918176 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00000100236 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA GCAATGTTGT TCAGATGCGC GCCATGGATC GCGCCGCCAT CGACCGGTAC
CGGATTCCCG AAGAAATTTT GATGGAAAAC GCCGGTCAGG CAGCCTTTTC CGTCCTGGGA
AGAATGGGGC CCCTGGCAAA TCGCACCTTC GTCATCCTCT GCGGTCTCGG CAACAACGGC
GGAGACGGCT TTGTCGTGGC CCGTAAAATC CACTCGGCCG GCGGGGTGGC CAAAGTTCGG
ATACTCGGCG ATCCGGCCCG TTTTAGCGGC GCCGCACACC TTAACCTGGA AATCCTTCGC
CAGCTGCCGA TGGACATCCG GCAACTCGAT AATTCAGAGG GGATCTGCAC GGAACTCGCC
CACTGCTCCA CCGTCATCGA CGCCATCTTC GGCACCGGTC TTAGCCGCGG AGTCAGCGGC
CTGCATCGCG AAGTAATCGA GGCTGTCAAC CAGTGCGGTA AACCCGTTCT GAGTCTCGAT
ATCCCTTCCG GCGTGCAGGG CGACACGGGG CAGATACTCG GCTGCGCCAT TCGTGCAGAG
CATACGGTGA CTTTCGGACT GCCCAAAATC GGCAATCTGC TCTACCCGGG CTTTGCCCTG
GGGGGCCAGT TGCACGTCAG CCACATCAGT TTTCCGCCGG AACTGTATCG CAGTGATGAT
TTGAAAATCG CCATCAATAC GCCATCCCCC TTGCCGCCCC GCGACCAGAC CGGGCATAAG
GGCAGCTTCG GCCAGGCGCT GTTCGTTGCC GGAGCCGCCG GTTATCTTGG CGCACCCTGC
TTTGCGGCCC TCGCCTACCT CAAGGCCGGT GGCGGTTACA GCCGCCTTGC GGCGCCGGCG
GCCATCACCC CTTTCATCGC CATGAAGGGA AGCGAACTGG TATTTTTGCC GCAGCAGGCT
ACGGATTCGG GCAGCATCGC GCTGTGCAAC CGCGATGCGC TGTTGCAACA GGCCAATGCC
CTCGACATGA CCATACTCGG TCCCGGTTTA TCCCTCGATC CGCAAACTCA GCAACTGGTA
CGGGAGCTGA CAGCAGGCAT CGACCGCCCC CTGCTGCTCG ACGGCGACGG CATTACCGCG
ATCTGTGCGA ATCTGGATCT GGTACGCCAA CGACAGGCTC CCACCGTACT GACCCCCCAC
CCGGGAGAGA TGTCCCGACT GACGGGGAAA AGTGTCGCCG AGCTGGAACA AAACCGTATC
GAAGCCGTCC AGCAGGCCGC TATCGATCTC AATGCCACCA TCGTCTTGAA AGGTGCGCAC
TCCCTGATCG GCTGCCCGGA CGGACGCGTC TTCATCAACC TCAGCGGCAA CAGCGGCATG
GCTTCGGCCG GTTCCGGGGA TGTGCTCACC GGCACCATCG CCGCCATGCA CGGACTCGGC
CTGAATACCG AGGAAGCGGT CTGCAAAGGC GTCTTCCTGC ACGGCGCCGC AGGTGATCTT
GCGGCAACCG CACAGGGCGA AGACGGCATG ACCGCCCAGG ATATTCTTGA GCATCTCCCG
CTTGCCCTTA AACATGAACG CCAGGAATGG CCGGCGGAAT TTTTGCGGCG TTACGCCGGA
CCTTGTCCGG CATAA
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| Protein sequence | MKVSNVVQMR AMDRAAIDRY RIPEEILMEN AGQAAFSVLG RMGPLANRTF VILCGLGNNG
GDGFVVARKI HSAGGVAKVR ILGDPARFSG AAHLNLEILR QLPMDIRQLD NSEGICTELA
HCSTVIDAIF GTGLSRGVSG LHREVIEAVN QCGKPVLSLD IPSGVQGDTG QILGCAIRAE
HTVTFGLPKI GNLLYPGFAL GGQLHVSHIS FPPELYRSDD LKIAINTPSP LPPRDQTGHK
GSFGQALFVA GAAGYLGAPC FAALAYLKAG GGYSRLAAPA AITPFIAMKG SELVFLPQQA
TDSGSIALCN RDALLQQANA LDMTILGPGL SLDPQTQQLV RELTAGIDRP LLLDGDGITA
ICANLDLVRQ RQAPTVLTPH PGEMSRLTGK SVAELEQNRI EAVQQAAIDL NATIVLKGAH
SLIGCPDGRV FINLSGNSGM ASAGSGDVLT GTIAAMHGLG LNTEEAVCKG VFLHGAAGDL
AATAQGEDGM TAQDILEHLP LALKHERQEW PAEFLRRYAG PCPA
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