Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0505 |
Symbol | |
ID | 3725892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 615098 |
End bp | 616141 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637750091 |
Product | Tfp pilus assembly protein, pilus retraction ATPase PilT |
Protein accession | YP_355935 |
Protein GI | 77918120 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA TTGATGCGCT GTTCAAAATA TTGAAAGAAA AAGGCGGATC GGACCTGCAC CTTTCAGCAG GCAATCCGCC GCTTATACGC CGATCGGGGC AACTGGAACC CATTTTGACT CAAGTTCTGA CCCACGAACA AAATAAGGCG TTGCTCTACG AAATTATGGG CGAAGCCCAG CGCAAAACCT ATGAAACGAC CCGCGATCTC GATTTTGCCT ATGAGGTAAC GGAGCTTAAA TCGCGTTTTC GTGCCAACAT CTTTATGGGC CGGCTCGGTA TGGGCGCTGT GTTTCGCCTG ATTCCCGCTG AGATCCTCAG CGCCGACCAG CTTGGCCTTC CCCCTGCGGT ACTCGATTTC ACCCAGTTCA AAAAAGGTCT GGTACTGGTC ACCGGACCGA CCGGAAGCGG CAAATCGACC ACCCTGGCGG CCATGATCGA TCATGTCAAC CGGACCCGCA AAGAACACAT CCTTACCGTC GAAGATCCCA TTGAATTCGT GCATGTCAGC CAGCAGAGCC TCATCAATCA GCGAGAAGTC GGGCGCCACA CCCGCTCCTT TGCCGCCGCC CTCAAAGCGG CTCTACGCGA AGATCCGGAT CTGATCCTGG TCGGCGAGAT GCGCGATCTG GAAACCATCG AACTGGCCAT CACGGCGGCA GAAACCGGGC ATCTGGTATT TGGCACCCTG CATACCAGCA GCGCCGCCAA AACGGTGGAT CGCATCATCA ATGTCTTTCC CACCAACCAG CAGGAGCAGG TCCGCACCAT GCTCGGCGAA TCCCTCAAGG GAGTCATCGC CCAACAACTG CTAAGGACGG TGGACGGCAA GCGTTGCGCC GCCCTTGAGA TCCTGTCTGT AAATTCGGCC GTCTCCAACC TGATCCGGGA AGGTAAAACC TTCCAGATTC CGTCGGTTAT TCAAACCGGT AAAACGCAGG GCATGCAGCT CATGGACCAG GCCATTCAGG ATCTTCTGAC CGCGGGAAAA ATCACCCGCG AGGAAGCTCA CAAATTCGCC TCCAACAAGG CCCTGTTCCA ATAA
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Protein sequence | MAKIDALFKI LKEKGGSDLH LSAGNPPLIR RSGQLEPILT QVLTHEQNKA LLYEIMGEAQ RKTYETTRDL DFAYEVTELK SRFRANIFMG RLGMGAVFRL IPAEILSADQ LGLPPAVLDF TQFKKGLVLV TGPTGSGKST TLAAMIDHVN RTRKEHILTV EDPIEFVHVS QQSLINQREV GRHTRSFAAA LKAALREDPD LILVGEMRDL ETIELAITAA ETGHLVFGTL HTSSAAKTVD RIINVFPTNQ QEQVRTMLGE SLKGVIAQQL LRTVDGKRCA ALEILSVNSA VSNLIREGKT FQIPSVIQTG KTQGMQLMDQ AIQDLLTAGK ITREEAHKFA SNKALFQ
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