Gene Pcar_0431 details

Gene Information

• Locus tag: Pcar_0431
• Symbol: uup
• ID: 3723144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 525479
• End bp: 527404
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637750017
• Product: putative ATP-binding component of a transport system
• Protein accession: YP_355861
• Protein GI: 77918046
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000000000359167
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAT CAGGAAGAGA GATCATTACC AAAATGGCTT TGTTGAGTTT ACAGAATGTC 
AGCCTGGCTT TTGGCGGCCC GGCGTTGTTC GAAGATGTCA GCCTGCATGT AGAGCGCGGC 
GATCGCGTCG GATTGCTGGG GCGTAACGGA TGCGGCAAAT CGACCTTGTT GCGCCTCATT 
GCGGGTGAAT TGAAACCGGA TAGCGGTGCC GTGGTGTGCC GCCAGGGGGT ACGGATCGCC 
AGCCTGCCGC AGGATGTGCC CGCGGATCTG ACCGGCACCG TTTACGAGGA AGTTCTATGT 
GGGCTCGGGC CGGTTGGGCA GGACCTTCTG CGCTACCATC GCCTTGCCCG GCTGGTTCGG 
GACGGCGACG AAAGTCGGTT GCAGGCATTG CTCGAGAGTC AGCAGTCTCT GGAGGCGTCC 
GGGGGATGGC CGCTGGAGCA GTTGGTGGGG CAGGTTCTGT CTCACCTGCA TCTGGATGGC 
GATGTGCCGG TGTGCGATCT TTCCGGCGGC GTCAAGCGCC GGGTGCTGCT GGCCCGCGCC 
CTGGTCGGCG AGCCTGATGT GCTGTTGCTG GACGAGCCGA CCAACCATCT CGATATCGAT 
ACCATCGATT GGCTGGAAAG TTTCTTGTTG CGTTCGTCGC TGACCTTGCT GTTCGTTACC 
CATGACCGCG AGTTTCTCAA AGCTCTGGCG ACCCGCACGG TTGAACTCGA TCGTGGTCAT 
CTGTTCGATT TTGCCTGCGA TTATCCTACC TTTTTGCGCC GGCGGGAGGA GACGCTGCAT 
GCCGAGGAGC AGCAGTGGCA GCGCTTCGAC CGCAAACTGG CCCAGGAGGA AGTCTGGATA 
CGCCAGGGCA TCAAGGCGCG CCGCACCCGC AATATGGGGC GTGTGCGCGA GTTGCAGCGC 
ATGCGTGAAG AACGTCTGCA ACGCCGCAAC CGGACCGGCA AGTCCCGCCT GCAACTGCAG 
GAGGCCAGCC GTAGCGGTAA ACTGGTGGCG GAACTGGAGG GAGTCTGTTT CGGCTATGGC 
GACAAACCGG TGGTCAAGGA TCTGACCACC ACCATCATGC GCGGCGACCG GGTCGGTATT 
ATCGGGCCGA ACGGGGTCGG CAAATCGACT CTGCTCAAGC TGATTCTCGG TCAGCTGGCG 
CCGCAGCAGG GGCAACTGCG TCTCGGCACC AATCTCGAAG TGCTCTACTT CGATCAGTTG 
CGCGAGCAAC TCGATCCGGA TGCCACCGTG CAGCAGAACT TGTCCGGCGA CCAGGACACG 
GTGCTGGTGG GTGGCACCCC GCGGCATGTT TACGGGTATC TGCAGGATTT TCTGTTCACC 
CCGGATCGGG CCCGTACGCC GGTGCGCATT CTGTCCGGCG GAGAGCGTCA TCGCCTGCTG 
CTGGCCAAGT TATTCACCCG GGAAGCCAAT GTTCTGGTGT TGGATGAACC GACCAACGAT 
CTGGATCTGG AGACCCTGGA GCTGCTGGAA GAGTTGCTGG CCGAATTCTC CGGCACGGTG 
TTGCTGGTCA GCCATGACCG GGCGTTTCTC GACCGGGTGG TGACGGGTAC CCTGGTGTAC 
GAGGGCGAGG GCCGTTTTGT CGACTATGTC GGCGGCTACC AGGACTGGCT GCGGCAGCGG 
CCTGTGCCGG AACCGGAACC GGAACCGGTG GCGGCCAAGC CGGCCAAGCC GGCCAAAAGT 
AAGCCGGAGC GTTCACGGCC GCGCAAATTG AGTTTCAAGG AGCGACGCGA GCTTGAGGGA 
TTGCCGTTGC GCATCGAGGC GTTGGAGACC GAGCAGGCCG ATCTGCACGA GAAGCTGGCG 
GATCCTGCTT TTTACAAGGA GCAGGGCGAT GCTGTGTCCG CGGTGCGCGA TCGTATGACG 
TGTCTTGAGG AGGAGTTGGC GGAGTGTTTT GTGCGTTGGG AGGAATTGGA GGCGTTGGCG 
GAGTAA 

 

Protein sequence

MKQSGREIIT KMALLSLQNV SLAFGGPALF EDVSLHVERG DRVGLLGRNG CGKSTLLRLI 
AGELKPDSGA VVCRQGVRIA SLPQDVPADL TGTVYEEVLC GLGPVGQDLL RYHRLARLVR 
DGDESRLQAL LESQQSLEAS GGWPLEQLVG QVLSHLHLDG DVPVCDLSGG VKRRVLLARA 
LVGEPDVLLL DEPTNHLDID TIDWLESFLL RSSLTLLFVT HDREFLKALA TRTVELDRGH 
LFDFACDYPT FLRRREETLH AEEQQWQRFD RKLAQEEVWI RQGIKARRTR NMGRVRELQR 
MREERLQRRN RTGKSRLQLQ EASRSGKLVA ELEGVCFGYG DKPVVKDLTT TIMRGDRVGI 
IGPNGVGKST LLKLILGQLA PQQGQLRLGT NLEVLYFDQL REQLDPDATV QQNLSGDQDT 
VLVGGTPRHV YGYLQDFLFT PDRARTPVRI LSGGERHRLL LAKLFTREAN VLVLDEPTND 
LDLETLELLE ELLAEFSGTV LLVSHDRAFL DRVVTGTLVY EGEGRFVDYV GGYQDWLRQR 
PVPEPEPEPV AAKPAKPAKS KPERSRPRKL SFKERRELEG LPLRIEALET EQADLHEKLA 
DPAFYKEQGD AVSAVRDRMT CLEEELAECF VRWEELEALA E