Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0411 |
Symbol | |
ID | 3723065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 503192 |
End bp | 504412 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637749996 |
Product | U32 family peptidase |
Protein accession | YP_355841 |
Protein GI | 77918026 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1.52498e-17 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCGC AGCCTGAATT GCTGGCGCCT GCCGGAAATC TGGAAAAACT CGAAACGGCC TTGATGTACG GCGCCGATGC TGTTTATGCG GGAGGGGAAT ATTTCGGCTT GCGGGCACAG GCGGATAATT TCACCCTTGA GCAACTGGCT CGGGCCAGGG ACTTGACCCT GCGCCTGAAT CGGCGTCTGT ATCTGACGTT GAATGCCTAT CTGCTGCCGG GCGAAACGGA CGCCTTCGCC GCTTATGTGG AACAATTGCG GTCCCTGGAG CTGGATGCCT ACATCGTTGC CGATCCGGGA GTGTTTGCCC TGGTACGAAG GGTTGATCCA GGGCGGGAGA TCCACCTCTC CACTCAGGCC AATACCACCA ATGCCGAAGC TGTCCGTTTC TGGGCGGGGC TCGGTGTGCG GCGCGTCAAT CTGGCCCGCG AGTTGAGTCT GGAGGATATC CGTTCTATCC GGGCCGCCAC CGATACGGAG TTGGAGGTTT TTGTTCACGG TGCCATGTGC GTGGCTTATT CCGGTCGCTG TCTTCTGTCG GCGGCTCTTA CCGGACGCAA TGCCAACCGG GGGTTGTGCA CTCAGCCCTG CAGGTGGGAT TACGCGCTGA CGGAAAAGAC CCGTCCGGGT CAATATTTTC CCATTGCCGA AGATGCACGG GGCAGTTACC TGCTGAACAG CCGCGATTTG TGTCTGCTGG AACAATTGCC GCTATTGGTC GAGGCCGGAG TCGACAGTCT CAAGATCGAG GGGCGCATGA AAAGCCGCTA TTACACCGCG GTGGTAACGC GTGTTTACCG GGAGGCCCTG GATCGGTATC TGGAAAACCC CGGAGACTGG CGTTGCCTGC CGAGTTGGCG GGAGGAGTTG GAGAGCGTCA GCCATCGGCC GTACAGCACC GGGTTTCTCC TCGGTAAGGA CGATCCCCAA TTAGAGCCGG ATCACGGCGG TTATATCCGT TGTTACGATT TTGTCGGTGA GGTTGTCGGC ATCGTCGGTG ATGGTCGGGG GGAGATCCTC GGGCGTAATC GCTTTTTTCC CGGAGAAACT CTGGAGCTGA TCGGACCGGG TATGCGCCTG GCCCGTTTCG AGGTGCAGGA ACCCACGGCT GAAGACGGTT CGCCGTTGTC GGTGGTGCAG CCCAATGCGC GGGTGCAGCT GCCTTTGCCT GCCGGGGCAA AGGTCGGCGA TCTGTTGCGC CGCAAACGGT CGCAGGACTA G
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Protein sequence | MISQPELLAP AGNLEKLETA LMYGADAVYA GGEYFGLRAQ ADNFTLEQLA RARDLTLRLN RRLYLTLNAY LLPGETDAFA AYVEQLRSLE LDAYIVADPG VFALVRRVDP GREIHLSTQA NTTNAEAVRF WAGLGVRRVN LARELSLEDI RSIRAATDTE LEVFVHGAMC VAYSGRCLLS AALTGRNANR GLCTQPCRWD YALTEKTRPG QYFPIAEDAR GSYLLNSRDL CLLEQLPLLV EAGVDSLKIE GRMKSRYYTA VVTRVYREAL DRYLENPGDW RCLPSWREEL ESVSHRPYST GFLLGKDDPQ LEPDHGGYIR CYDFVGEVVG IVGDGRGEIL GRNRFFPGET LELIGPGMRL ARFEVQEPTA EDGSPLSVVQ PNARVQLPLP AGAKVGDLLR RKRSQD
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