Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0409 |
Symbol | |
ID | 3723198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 501060 |
End bp | 502061 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637749994 |
Product | LysM domain-containing protein |
Protein accession | YP_355839 |
Protein GI | 77918024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000000322112 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA TCTGCAAAGC ACTGGCGGTC TTGTGCCTGC TGTTCCCGCT TGCAGCTACA GCACAAACAC CGGAGCCAAT CTACACCATT AAAAAAGGCG ACACCCTGTG GGGCATCTCC GAAAAATTCA TCAAAGACCC CTACTACTGG CCCAATCTGT GGGCCAATAA TCCCTTTATC ACCAACCCCC ACTTCATCTA TCCGGGGCAG CAGGTCGCCA TTCGCGACGG ACGGCTGGTG TTGCTGCCGG GGCACGCCGA GGAGACAACC GCGCCGCCCG CAGACACCGC GTCTGAGAGC CTGCCGATCG AGCCGACGGA GGAAATCACC GTCAAAGGCG TGGCCGGAAA CGAAGGTTTC GTCACCCTCG ATGCTCTGGA ACAGGCCGGA ACCCTGGTCG ATGCCACCGA CGACCGCATT ATGCTCGGCA AACACGATCA GGTATTTGTA AAAATCAATA CTCCCGATGT ACAGCTCGGC GCTGTCTACT CCCTGGTCGA CCTGGGAGAA AAGATCAAAC ATCCCGTCAG CAACAAGGTT CTCGGCCACC GGGTCAGTTT CCTCGGAACT GCCGAAATCA TCGACATCTC CCCTTCGGTC GCCACCGCTG TCATTCGAAG CTCCGTCAAA GAGATCACCC GCGGTGCCCT CCTGCTGCCT CTGCAGCCGG CCAATCGTGA AATCGTGCTG AAAAAAGCCA CCGCCCCCCT GCTGGGGAGC GTCATCGCCA ACAGCCGGGA AAAACTCGCA TTGAGCCAGC ACGATGTGAT TTATCTCGAC CTTGGCGACG AAGACGGTTT GCAGGTCGGC AACATGGTAT ACCTGTCCCG TCCCCGCGAA ACCACTCACC GGGTATTGCC CGACCATGAC GTGGAATTGC CGGACGAACT GCTGGGCGCC GCCGTGGTAC TGAGTACGCA ACCGCGAACC TCAACGGCCC TGATCCTCAA ATCGGTCAAC CCCATTTATG CCGGCGACCG GGTTTCCACT CCCGACGAGT AG
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Protein sequence | MKTICKALAV LCLLFPLAAT AQTPEPIYTI KKGDTLWGIS EKFIKDPYYW PNLWANNPFI TNPHFIYPGQ QVAIRDGRLV LLPGHAEETT APPADTASES LPIEPTEEIT VKGVAGNEGF VTLDALEQAG TLVDATDDRI MLGKHDQVFV KINTPDVQLG AVYSLVDLGE KIKHPVSNKV LGHRVSFLGT AEIIDISPSV ATAVIRSSVK EITRGALLLP LQPANREIVL KKATAPLLGS VIANSREKLA LSQHDVIYLD LGDEDGLQVG NMVYLSRPRE TTHRVLPDHD VELPDELLGA AVVLSTQPRT STALILKSVN PIYAGDRVST PDE
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