Gene Pcar_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0409 
Symbol 
ID3723198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp501060 
End bp502061 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content58% 
IMG OID637749994 
ProductLysM domain-containing protein 
Protein accessionYP_355839 
Protein GI77918024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000000322112 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TCTGCAAAGC ACTGGCGGTC TTGTGCCTGC TGTTCCCGCT TGCAGCTACA 
GCACAAACAC CGGAGCCAAT CTACACCATT AAAAAAGGCG ACACCCTGTG GGGCATCTCC
GAAAAATTCA TCAAAGACCC CTACTACTGG CCCAATCTGT GGGCCAATAA TCCCTTTATC
ACCAACCCCC ACTTCATCTA TCCGGGGCAG CAGGTCGCCA TTCGCGACGG ACGGCTGGTG
TTGCTGCCGG GGCACGCCGA GGAGACAACC GCGCCGCCCG CAGACACCGC GTCTGAGAGC
CTGCCGATCG AGCCGACGGA GGAAATCACC GTCAAAGGCG TGGCCGGAAA CGAAGGTTTC
GTCACCCTCG ATGCTCTGGA ACAGGCCGGA ACCCTGGTCG ATGCCACCGA CGACCGCATT
ATGCTCGGCA AACACGATCA GGTATTTGTA AAAATCAATA CTCCCGATGT ACAGCTCGGC
GCTGTCTACT CCCTGGTCGA CCTGGGAGAA AAGATCAAAC ATCCCGTCAG CAACAAGGTT
CTCGGCCACC GGGTCAGTTT CCTCGGAACT GCCGAAATCA TCGACATCTC CCCTTCGGTC
GCCACCGCTG TCATTCGAAG CTCCGTCAAA GAGATCACCC GCGGTGCCCT CCTGCTGCCT
CTGCAGCCGG CCAATCGTGA AATCGTGCTG AAAAAAGCCA CCGCCCCCCT GCTGGGGAGC
GTCATCGCCA ACAGCCGGGA AAAACTCGCA TTGAGCCAGC ACGATGTGAT TTATCTCGAC
CTTGGCGACG AAGACGGTTT GCAGGTCGGC AACATGGTAT ACCTGTCCCG TCCCCGCGAA
ACCACTCACC GGGTATTGCC CGACCATGAC GTGGAATTGC CGGACGAACT GCTGGGCGCC
GCCGTGGTAC TGAGTACGCA ACCGCGAACC TCAACGGCCC TGATCCTCAA ATCGGTCAAC
CCCATTTATG CCGGCGACCG GGTTTCCACT CCCGACGAGT AG
 
Protein sequence
MKTICKALAV LCLLFPLAAT AQTPEPIYTI KKGDTLWGIS EKFIKDPYYW PNLWANNPFI 
TNPHFIYPGQ QVAIRDGRLV LLPGHAEETT APPADTASES LPIEPTEEIT VKGVAGNEGF
VTLDALEQAG TLVDATDDRI MLGKHDQVFV KINTPDVQLG AVYSLVDLGE KIKHPVSNKV
LGHRVSFLGT AEIIDISPSV ATAVIRSSVK EITRGALLLP LQPANREIVL KKATAPLLGS
VIANSREKLA LSQHDVIYLD LGDEDGLQVG NMVYLSRPRE TTHRVLPDHD VELPDELLGA
AVVLSTQPRT STALILKSVN PIYAGDRVST PDE