Gene Pcar_0303 details

Gene Information

• Locus tag: Pcar_0303
• ID: 3723351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 383118
• End bp: 383717
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637749883
• Product: redox protein, regulator of disulfide bond formation
• Protein accession: YP_355733
• Protein GI: 77917918
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0425] Predicted redox protein, regulator of disulfide bond formation
• TIGRFAM ID: [TIGR03527] selenium metabolism protein YedF

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0000000562968
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAAC GCGTTATCGA TTGCCGGGGC TTGTCCTGTC CACGGCCTGT GGTAGAGACC 
AAAAAGGCCA TGGAGGCGTT CCCGGATGCG GAAATCGAGG TGCTGCTGAA TGACGAGATC 
GCCTGCGAGA ATGTGTCACG ACTTGCCGCC GGCCGCCATT GGACAGTGGT CGCCGTGACC 
CGGGAGGGAG AGGATATCCA GCTTCTGCTG CGGTCGGAAA ACGCCGAAGC CGGCGAGCCT 
GCCCCGGAAG CTTTGTCCGA TGAGGAGGCC TTTCTGGTCT ATTGTCCGTC GGACAAGCTC 
GGCCGGGGAG ACGATAAACT GGGCGAGATA TTGATGCAGA GTTTTATCAA ATCACTTGTC 
GATATGCCTC CGTTGCCAAA ACGGATAGTT TTTCTCAATA GCGGTGTGCG ACTGGCAACC 
GAAGGGTCGG CGGTTCTCGA TACGCTGCGG TATTTCGAGG AACAGGGGGT GGAAATTTTC 
TCCTGCGGAA CCTGCCTCGA TTTCTTCGGC CTCAAGGAGC AACTGCGGGT CGGCAATGCC 
ACCAATATGT TCGAGATCAT AACGGCGCTG CGGAGTTTTG ACCGGGTGGT GCAGCCATGA 

 

Protein sequence

MAKRVIDCRG LSCPRPVVET KKAMEAFPDA EIEVLLNDEI ACENVSRLAA GRHWTVVAVT 
REGEDIQLLL RSENAEAGEP APEALSDEEA FLVYCPSDKL GRGDDKLGEI LMQSFIKSLV 
DMPPLPKRIV FLNSGVRLAT EGSAVLDTLR YFEEQGVEIF SCGTCLDFFG LKEQLRVGNA 
TNMFEIITAL RSFDRVVQP